| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2728 |
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| Symbol | |
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| ID | 8426269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2794073 |
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| End bp | 2794744 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645028855 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003186121 |
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| Protein GI | 258512687 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.191075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTCGACGC AGCCGACACC AAGAGACGCC GACGCGGCCC CGCCGTACGA CACGGCGCCC
TACGAGAACA TGACGGACGA AGAGCTGGTC GAGGCTGTTC ATCGAGGCGA CACCGACGCG
CTCGACTATT TGATTCACAA ATACAAGAAT TTCGTTCGGG CCAAGGCGCG GTCGTACTTT
CTCATTGGGG CTGATCGGGA AGACATCGTA CAGGAAGGCA TGATTGGGCT GTACAAGTCC
ATCCGCGATT TTCGCGGAGA CAAGCTCTCC TCCTTCAAGG CGTTCGCCGA ACTGTGCATC
ACGCGTCAGA TTATCACCGC TATCAAAACA GCCACGAGAC AAAAGCATAT TCCGCTCAAT
TCCTACGTTT CGCTGGACAA GCCCATTTAC GATGAGGACT CGGATCGCAC GCTGCTCGAC
GTCATCTGTA CCGTGCGCGT CGCGGATCCG GAAGAGCTGA TTATAAACCA GGAAGAGTTT
GACGATATTG AGGGTAAGAT GTCCGAATTG CTGAGCGATC TGGAGCGCCA GGTCTTGATG
CTGTATCTCG ACGGGCGTTC GTATCAGGAG ATTGCGGTGG ATCTCGCTCG GCATGTCAAA
TCCATCGACA ACGCCCTTCA GCGGGTCAAG CGGAAGCTGG AGAAATACTT GACGGTGCGC
AACGTGATAT GA
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| Protein sequence | MSTQPTPRDA DAAPPYDTAP YENMTDEELV EAVHRGDTDA LDYLIHKYKN FVRAKARSYF
LIGADREDIV QEGMIGLYKS IRDFRGDKLS SFKAFAELCI TRQIITAIKT ATRQKHIPLN
SYVSLDKPIY DEDSDRTLLD VICTVRVADP EELIINQEEF DDIEGKMSEL LSDLERQVLM
LYLDGRSYQE IAVDLARHVK SIDNALQRVK RKLEKYLTVR NVI
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