| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2719 |
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| Symbol | |
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| ID | 8426260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2785879 |
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| End bp | 2789409 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645028846 |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_003186112 |
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| Protein GI | 258512678 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGGGAC ACATGGTCAA GTACGGATGG GCGGAGCGCC GCAGCTACGC GCGCATTCGC
GAGGTCCTCG ATCTCCCAAA CCTCATCGAG ATCCAACAGA AATCGTACGA GTGGTTCCTG
CGGGAGGGCC TGCGCGAGAC GTTCGCGGAC ATCTCTCCCA TCACGGACTT CACCGGGAAC
CTTGTGCTTG AGTTCGTGGA CTACAGCCTC GGCGAGCCCA AGTACGACGT GGAAGAATCC
AAGGAGCGCG ATGTGACGTA TGCGGCGCCG CTTCGCGTGA AGGTTCGCCT GCTCAACAAG
GAGACGGGCG AGGTCAAAGA GCAAGAGGTG TTTCTCGGCG ACTTCCCGCT CATGACCGAG
ACGGGCACCT TCATCATCAA CGGCGCGGAG CGCGTCATCG TGAGCCAGCT CGTCCGCTCC
CCCAGCGTCT ATTATAGCAG CAAGATCGAC AAGAATGGCA AACGCACGTT CGCCGCGACG
GTCATTCCGA ACCGCGGCGC TTGGCTCGAG TTTGAGACGG ACGCGAAGGA CGTCGTGTAC
GTCCGGATCG ATCGCACGCG CAAGCTGCCT ATCACGGTCT TGCTCCGGGC GCTGGGATTG
TCGTCCGACG CCGAGATCAT CGAACTGTTA GGCGAGGACG AGTACCTGCA GAACACGCTC
GACAAGGATA CCACGGACTC GACGGAGCGG GCGCTCATCG AGATCTACGA GCGGCTGCGC
CCGGGCGAAC CGCCCACGGT GGAGAACGCG CGGGCGTTGC TTGCGTCTCG GTTCTTCGAC
CCCAAGCGGT ACGATCTCGC CGCGGTCGGC CGGTATAAGA TCAACAAAAA GCTCCATCTC
AAGAACCGCC TGCTGAACCA GCGGCTGGCG GAGACGCTCG TCGACGAGGA GACGGGCGAG
ATCATCGCCG AAGCCGGGAC GGTGCTGGAT CGCCGCACGC TGGATCGGAT CATTCCGCGC
CTGTCTGGCA AGGTTGGGCG ATTCACCATC CGCGGCACGC GGGATTTGTT TGAACAAGAC
GAGATCCCGC TGCAGATGGT GAAGATTTTC AGCCCGGCGG AGGACGGAAA GGTCCTGCAC
GTCATCTCCA ATGGCGAACT GCCGGCGGAC GTCAAATACA TCACGCCGTC CGACATCATC
GCGGCGGTCT CGTACTTCTT CAACCTCCTG CGCGGCGTGG GGACGACGGA CGACATCGAT
CACCTGGGCA ACCGGCGCCT CCGCTCGGTG GGCGAGCTGT TGCAAAACCA GTTCCGCATC
GGGCTCTCCC GCATGGAGCG CGTGGTGCGC GAGCGCATGT CCATTCAGGA TGCGAGCGCG
ATCACGCCTC AGGCCCTGAT CAACATTCGC CCGGTGATTG CGGCCATCAA GGAGTTCTTT
GGGTCCAGCC AGCTTTCGCA GTTCATGGAT CAGACGAATC CGCTCGCTGA ACTCACGCAT
AAGCGGCGCC TCTCGGCGCT CGGGCCAGGC GGTCTTACGC GCGAGCGGGC CGGCTTCGAA
GTGCGCGACG TGCACTACTC GCACTACGGC CGCATGTGCC CCATCGAGAC GCCGGAAGGG
CCGAACATCG GCCTCATCAA CTCGCTCTCG ACCTACGCGT GCGTCAACGA GTACGGCTTC
ATCGAGACGC CGTACCGGCG CGTCGATCCA GAGACGGGCG TGGTGACGGA TCAGATTGAC
TATCTAACGG CGGATGAGGA GGAGAACTAC CTCATCGCGC AGGCGAACGA GCCGCTGACC
GAGGACGGCC ATTTCGTGGC CGAGGAGATC ACGGTGCGCT CGCGCGAAGA CGTGATCACC
GTGAGCCGCG ATCGCATCGA CTACATGGAC GTCTCGCCGA AGCAGGTCGT GTCGGTCGCC
ACGGCGCTGA TCCCGTTCCT CGAGAACGAC GACGCGAACC GCGCGCTCAT GGGATCGAAC
ATGCAGCGCC AGGCGGTGCC GCTGCTCGTG ACCGATTCGC CGCTCGTGGG GACGGGCATG
GAGTACCAGG CGGCGAAGGA CTCCGGCGTG TGCGTGGTTT CCAAGCACAA CGGCGTCGTG
GAGCGCGTGA CGGCCCGCGA GATCTGGGTG CGCGAGGAAG CCGTCGTGGA CGGGCAGGTC
GTGAAGGGCA ACGTCCACAA GTACAAGCTC ATCAAGTTCG CGCGCTCGAA CCAGAACACC
TGCCTGAACC AGAGGCCCAT TGTGCGCGAG GGCGATCGCG TCAAAGTGGG GGATATTCTC
GCGGACGGGC CGGCGACGCA AAACGGCGAG CTGGCGCTCG GCCGGAACGT GCTCGTCGCG
TTCATGACCT GGGAGGGCTA CAACTACGAG GACGCGATTC TCATCTCGGA GAAGATGGTG
AAGGAGGACG TCTACACGTC CATTCACATT GAGGAATACG AGATCGAGGC GCGCGACACG
AAGCTCGGGC CTGAGGAGAT CACGCGCGAC ATCCCGAACG TGGGCGAGGA TGCGCTCAAA
AACCTCGACG AGCGCGGGAT CATCCGCATC GGCGCGGAGA TCACGACCAA CGACATTCTC
GTCGGCAAGG TGACGCCGAA GGGCGTGACG GAGCTCACCG CGGAAGAGCG GCTGTTGCAC
GCGATTTTCG GCGAGAAGGC CCGGGAGGTG CGCGACACGT CGCTGCGCGT GCCGCACGGG
GGGGCCGGGA TCGTCGTGGA CGTCAAGGTG TTCACGCGCG AGAACGGCGA CGAGCTGCCC
GCTGGCGTGA ACCAGTTGGT GCGGGTGTAT GTCGCGCAAA AGCGCAAGAT CTCGGAGGGC
GACAAGATGG CCGGGCGCCA CGGGAACAAG GGCGTCGTGG CGCGCATCCT GCCGGAAGAG
GATATGCCGT TCCTGGAGGA TGGAACGCCG GTCGAGATCG TGCTGAATCC GCTCGGCGTG
CCGTCGCGTA TGAACATCGG TCAGGTGCTC GAGACGCACC TGGGCATGGC CGCGAAGGTG
CTGGGGCTGA AAATGGCCAC GCCGGTGTTT GACGGCGCCA AGCCGGAGGA CGTGTTTGAG
ACGCTTCGCG AGGCGGGCTT GCCGGAGGAC GGCAAGCAGG TGCTGTACGA CGGCCGGACC
GGCGAGCCGT TCGAAAACCG CGTCACCGTG GGATACGTGT ACATGATGAA GCTGCACCAC
CTGGTGGACG ACAAGATCCA CGCGCGCTCC ACGGGTCCGT ACTCGCTCGT CACCCAGCAG
CCGCTCGGAG GCAAGGCCCA GTTCGGCGGT CAGCGGTTTG GCGAGATGGA GGTGTGGGCG
CTGGAGGCGT ACGGCGCGGC CTACACGCTG CAGGAGCTCC TCACGGTCAA GTCGGACGAC
GTGGTGGGGC GTGTCAAGAC GTACGAGGCC ATCGTCAAGG GCGAGAACGT GCCGGAGCCG
GGTGTGCCGG AGTCGTTCAA GGTGCTCATC AAAGAGCTCC AGAGCCTGGG GATGGACGTG
AAGATCTTGA GCGGCGACGA GCGCGAGATC GAGATGAAGG AGATGGACGA CGACGAGGAC
AGCCCCGACA AGCTCAATCT GAACCTGGAG TACAACGAGG TCGGCGATTG A
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| Protein sequence | MQGHMVKYGW AERRSYARIR EVLDLPNLIE IQQKSYEWFL REGLRETFAD ISPITDFTGN
LVLEFVDYSL GEPKYDVEES KERDVTYAAP LRVKVRLLNK ETGEVKEQEV FLGDFPLMTE
TGTFIINGAE RVIVSQLVRS PSVYYSSKID KNGKRTFAAT VIPNRGAWLE FETDAKDVVY
VRIDRTRKLP ITVLLRALGL SSDAEIIELL GEDEYLQNTL DKDTTDSTER ALIEIYERLR
PGEPPTVENA RALLASRFFD PKRYDLAAVG RYKINKKLHL KNRLLNQRLA ETLVDEETGE
IIAEAGTVLD RRTLDRIIPR LSGKVGRFTI RGTRDLFEQD EIPLQMVKIF SPAEDGKVLH
VISNGELPAD VKYITPSDII AAVSYFFNLL RGVGTTDDID HLGNRRLRSV GELLQNQFRI
GLSRMERVVR ERMSIQDASA ITPQALINIR PVIAAIKEFF GSSQLSQFMD QTNPLAELTH
KRRLSALGPG GLTRERAGFE VRDVHYSHYG RMCPIETPEG PNIGLINSLS TYACVNEYGF
IETPYRRVDP ETGVVTDQID YLTADEEENY LIAQANEPLT EDGHFVAEEI TVRSREDVIT
VSRDRIDYMD VSPKQVVSVA TALIPFLEND DANRALMGSN MQRQAVPLLV TDSPLVGTGM
EYQAAKDSGV CVVSKHNGVV ERVTAREIWV REEAVVDGQV VKGNVHKYKL IKFARSNQNT
CLNQRPIVRE GDRVKVGDIL ADGPATQNGE LALGRNVLVA FMTWEGYNYE DAILISEKMV
KEDVYTSIHI EEYEIEARDT KLGPEEITRD IPNVGEDALK NLDERGIIRI GAEITTNDIL
VGKVTPKGVT ELTAEERLLH AIFGEKAREV RDTSLRVPHG GAGIVVDVKV FTRENGDELP
AGVNQLVRVY VAQKRKISEG DKMAGRHGNK GVVARILPEE DMPFLEDGTP VEIVLNPLGV
PSRMNIGQVL ETHLGMAAKV LGLKMATPVF DGAKPEDVFE TLREAGLPED GKQVLYDGRT
GEPFENRVTV GYVYMMKLHH LVDDKIHARS TGPYSLVTQQ PLGGKAQFGG QRFGEMEVWA
LEAYGAAYTL QELLTVKSDD VVGRVKTYEA IVKGENVPEP GVPESFKVLI KELQSLGMDV
KILSGDEREI EMKEMDDDED SPDKLNLNLE YNEVGD
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