| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2718 |
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| Symbol | |
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| ID | 8426259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2782192 |
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| End bp | 2785830 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645028845 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_003186111 |
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| Protein GI | 258512677 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTGACC TGAACAACTT TGAGTTCATG AAGATTGGGC TCGCGTCGCC GGAAAAGATC
CGCTCCTGGT CGCACGGCGA GGTGAAGAAG CCGGAGACCA TCAACTACCG CACGCTCCGC
CCGGAGAAGG AGGGGCTGTT CTGCGAGAAG ATCTTCGGCC CGACGCGGGA CTGGGAGTGC
CACTGCGGCA AGTACAAGCG GATCCGCTAC AAGGGTGTCG TGTGTGACCG CTGCGGCGTT
GAGGTCACGC GGTCCAAGGT GCGCCGCGAG CGCATGGGGC ACATCGAGCT GGCGGCGCCC
GTCTCGCACA TCTGGTTCTT CAAGGGCATC CCGAGCCGCA TGGGGCTCAT CCTCGACATG
TCGCCGCGGG CGCTCGAGGA GGTCATCTAC TTCGCGTCGT ACGTCGTGAC CGATCCCGGC
GATACGCCGC TCGAGAAAAA GCAGCTGCTC TCGGAGAAGG AGTACCGGTC CTACCGCGAG
AAGTACGGCT ACGCGTTCAA AGCGGGCATG GGCGCCGAGG CCATCCGCAC GCTCCTGCAG
GAGATCGATC TTGACCGCGA GGTTGAGATC CTGCGCGAGG AGCTGCGCAC GGCCCAAGGG
CAGCGGCGCA ACCGGGCCAT CAAGCGCCTA GAGGTCATCG AGGCGTTCCG TCAGTCCGGC
AACAAGCCGA GCTGGATGAT CCTCGAGGCG CTGCCGGTCA TTCCGCCGGA CCTGCGTCCC
ATGGTGCAGC TGGACGGCGG CCGCTTCGCC ACGTCCGACC TGAACGATCT GTACCGCCGC
GTCATCAACC GCAACAACCG CCTGAAGCGA CTGCTCGATC TCGGCGCGCC CGACATCATC
GTGCAGAACG AGAAGCGGAT GTTGCAGGAG GCTGTGGACG CGCTGATCGA CAACGGCCGG
CGTGGACGCC CGGTCACAGG ACCCGGCAAT CGGCCGCTCA AGAGCCTGTC GCACATGCTG
AAGGGCAAGC AGGGCCGCTT CCGCCAGAAC CTGCTCGGGA AGCGCGTCGA CTACTCCGGC
CGATCCGTCA TCGTGGTGGG GCCCGAGCTG CGCATGTACC AGTGCGGCCT GCCGAAAGAG
ATGGCGCTTG AGTTGTTCAA GCCGTTCGTC ATGAAGGAAC TGGTGGCGCG CGGGCTCGCG
CACAACATCA AGAGCGCGAA GCGCAAGGTC GAGCGCGTGT CGGATGAAGT GTGGGACGTC
GTCGAGGACG TCATCAAACA GCACCCTGTG CTGTTGAACC GCGCGCCGAC GCTGCACCGT
CTGGGCATTC AGGCGTTCGA GCCCGTCCTT GTCGAAGGGC GCGCCATCAA GCTGCATCCT
CTCGTCTGCA CGGCGTACAA CGCGGATTTC GACGGCGACC AGATGGCCGT GCACGTGCCG
CTTTCCGCCG AGGCGCAGGC GGAGGCGCGC CTGCTGATGC TTGCCGCGCA CAACATCCTG
AACCCGAAGG ACGGCAAGCC GGTCGTGACG CCGACGCAGG ACATGGTGCT CGGATCCTAC
TATTTGACCA TCGAGCGCGA GGGCGCGCCC GGCGAAGGCA AGGTCTTTGC GTCCGTGTCT
GAGGTGGAGT ACGCGCTCCA TCAGCGGCTC ATCACGCTGC AGACGCGCAT CGCGCTGCCG
GCCAAGGCGG TCGGCAAGAC GTCGTTCACG GAGAAGCAGG CGAATGCGCT CCTGATCACG
ACGCCGGGCA AGCTCATCTT CAACAGCATC TTCCCGTCCG ACTTCCCGTA TCTGAACTCT
GCGGCGAAGT CCAACCTGCT CGGCGGTCCG CCGGACGACA CGTTCATCTT CGAGAAGGGC
GTGGACATCC GCGAGGCGAT TCTCAAGCGC CCGATCCCGA AGGCGGTCAT CAAGAAGGAT
CTGGGCAACA TTCTGGCCGA ATGCTTCCGC CGCTATGGCA CGACGATGAC GGCCGAGATC
CTCGACAAGG TGAAGCGGCT CGGGTTCCAC TATTCGACGC TCGCCGGTAT CACCATCTCG
ATCAGCGACA TCGTGGTGCC CGAAGAGAAG AAGCGCATCA TCGCCGAGGC GGAGGCGAAG
GAACACAAGC TGAAGCTTCA ATACCGGCGC GGTCTCATCA CGGAAGAGGA GCAGTACGTG
ACCTTCAGCC AGATCTGGTC GGAGGCCAAG GAGCAGATCT CGTCCATCCT CATGGAGAGC
ATGGACCAGT TCAATCCCAT TTATATGATG GCCACTTCCG GTGCGCGCGG TTCGAACTCG
CAGATCACGC AGCTCGCGGG CATGCGCGGG CTCATGGCGA ACCCGTCGGG CGAGATCATC
CAGCTGGCCA TCAAGTCGAA CTTCCGCGAG GGCCTGTCGG TGTTGGAGTA CTTCATCTCG
ACCCACGGCG CGCGCAAGGG CCTCGCTGAC ACGGCGCTGC GCACGGCGGA CTCGGGTTAT
CTCACGCGCC GCCTCGTCGA CGTGGCGCAG GACACGATTG TGCGTGAGCA CGACTGCGGC
ACCGACAAGG GCCTGCGGGT CATGGAGATC CGCGATGGCA GCGAGGTCAT CGAAGACTTG
CGCGATCGCC TCGAAGGTCG TGTCGCGTTC CAGGATGTGT ATCACCCGGA GACGGGCGAG
AAGATCGTCG GCAAGAACGA GATGATCGAC GAGGAAGCCG CGGACAAGAT TGTCGCGGCG
GGCATCAAAG AGGTTACCAT CCGCTCCGTC CTGACCTGTC GCACGCGTCA CGGGGTGTGC
CAGCTCTGCT ACGGCCGCAA CTTGGCGACG GGCGATATGG TCGAGGTGGG CGAGGCGGTC
GGCATCATCG CCGCGCAGTC CATCGGCGAG CCGGGTACGC AGCTCACCAT GCGCACGTTC
CACACGGGCG GCGTGGCGGG TGACGACATC ACCCAGGGTC TGCCGCGCGT GCAGGAACTC
TTTGAGGCGC GCAACCCGAA AGGTCAGGCC GTGATCGCGG AGTTCGACGG CGTCATCACC
GACATCCGCG AGGGCAAGGA CAAGCGCGAA ATCGAGCTCA CGGGCGAGAG CGAGACGAAG
ACGTATCAGA TCCCGTACGG GTCGCGGATT CGGGTGAGCG TGGGCCAGCA GTTGGAGGCC
GGCGAGGAGC TCACGGAGGG CTCGGTCGAT CCGAAGGAGA TGCTGCGCGT CAAGGGCCTG
CAGGGCGTGC AAAACTACCT GCTGCGCGAG GTGCAGCGCG TTTACCGCCT GCAGGGCGTG
GACATCAACG ACAAGCACAT CGAGGTCATG ATCCGGCAGA TGTTGCGCAA AGTTCGCATC
CTCGACGCTG GAGACACGGA TCTCCTGCCG GGGACGTACG TGGATCTCTT CGAGTACGAA
GCCGCCAACC GGGAGGCACT TCTCTCGGGC AAGGAGCCTG CGGTGGCGCG CCCGGCGCTG
CTTGGGATCA CCAAGGCGTC GCTTGAGACG GATTCGTTCC TCTCGGCCGC GTCATTCCAA
GAGACGACCC GCGTGCTCAC CGAGGCGGCC ATCAAGGGCA AGGTAGATCG CCTGCTCGGC
CTGAAGGAGA ACGTGATCAT CGGCAAGTTG ATCCCGGCGG GCACGGGCAT GGTGAGGTAC
CGCAACGTGG AGCCGGAGGT CGTGCGCCCG GGCGACGCAG AGGCGGCTGC GACAGGCGAA
GAGGTTGCCG AAACCGAGGC TGTGTCGAGC GCGGAGTGA
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| Protein sequence | MFDLNNFEFM KIGLASPEKI RSWSHGEVKK PETINYRTLR PEKEGLFCEK IFGPTRDWEC
HCGKYKRIRY KGVVCDRCGV EVTRSKVRRE RMGHIELAAP VSHIWFFKGI PSRMGLILDM
SPRALEEVIY FASYVVTDPG DTPLEKKQLL SEKEYRSYRE KYGYAFKAGM GAEAIRTLLQ
EIDLDREVEI LREELRTAQG QRRNRAIKRL EVIEAFRQSG NKPSWMILEA LPVIPPDLRP
MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPDII VQNEKRMLQE AVDALIDNGR
RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIVVGPEL RMYQCGLPKE
MALELFKPFV MKELVARGLA HNIKSAKRKV ERVSDEVWDV VEDVIKQHPV LLNRAPTLHR
LGIQAFEPVL VEGRAIKLHP LVCTAYNADF DGDQMAVHVP LSAEAQAEAR LLMLAAHNIL
NPKDGKPVVT PTQDMVLGSY YLTIEREGAP GEGKVFASVS EVEYALHQRL ITLQTRIALP
AKAVGKTSFT EKQANALLIT TPGKLIFNSI FPSDFPYLNS AAKSNLLGGP PDDTFIFEKG
VDIREAILKR PIPKAVIKKD LGNILAECFR RYGTTMTAEI LDKVKRLGFH YSTLAGITIS
ISDIVVPEEK KRIIAEAEAK EHKLKLQYRR GLITEEEQYV TFSQIWSEAK EQISSILMES
MDQFNPIYMM ATSGARGSNS QITQLAGMRG LMANPSGEII QLAIKSNFRE GLSVLEYFIS
THGARKGLAD TALRTADSGY LTRRLVDVAQ DTIVREHDCG TDKGLRVMEI RDGSEVIEDL
RDRLEGRVAF QDVYHPETGE KIVGKNEMID EEAADKIVAA GIKEVTIRSV LTCRTRHGVC
QLCYGRNLAT GDMVEVGEAV GIIAAQSIGE PGTQLTMRTF HTGGVAGDDI TQGLPRVQEL
FEARNPKGQA VIAEFDGVIT DIREGKDKRE IELTGESETK TYQIPYGSRI RVSVGQQLEA
GEELTEGSVD PKEMLRVKGL QGVQNYLLRE VQRVYRLQGV DINDKHIEVM IRQMLRKVRI
LDAGDTDLLP GTYVDLFEYE AANREALLSG KEPAVARPAL LGITKASLET DSFLSAASFQ
ETTRVLTEAA IKGKVDRLLG LKENVIIGKL IPAGTGMVRY RNVEPEVVRP GDAEAAATGE
EVAETEAVSS AE
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