| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2674 |
|---|
| Symbol | |
|---|
| ID | 8426215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 2756056 |
|---|
| End bp | 2756808 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645028801 |
|---|
| Product | polysaccharide deacetylase family sporulation protein PdaB |
|---|
| Protein accession | YP_003186067 |
|---|
| Protein GI | 258512633 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0198792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGCT TCTGGAAGCG ACTTCGCGCG GGCGTCGCCG CGCTCACGGC CGCATGCGTG
TGCGCCGTGT CGTGCATGAG CCTGCAAGCC GGGTCGGTGC GCGCCGCCGA TACGAAGGCT
CAGGCCCCGA AGGCCGTGTA CAAGGTGGAT ACGAAGGAGA AAGTGGTGGC CCTGACCTTT
GACATCTCCT GGGGGCATCG CACGCCCGAG CCGGTGTTGG AGACGCTGAA GAAATGCGGT
GTGACGAAGG CGACGTTTTT TCTGAGCGGG CCCTGGACGA TGCACCATCC CGAGATCGCC
AAGAAGATCA AGGCCATGGG CTATGAAATC GGGAGCCACG GATACCTGCA CAAGGACTAT
TCGAATTACC CGGATTCCTG GATCCGAGAG CAGGCGATGC TCGCGGACAA GGCCATTCAG
CAGGTCACGG GCGTGAAACC GAAGCTGTTC CGGACGCCGA ACGGCGACCT CAATCTGCGG
GTCATTCGCT GTCTCACGAG CATGGGCTAC ACGGTGGTAC AGTGGAACAC CGACTCGCTC
GACTGGAAGA ACCCAGGCGT GGACGCGATT GTCAACCGGG TGACGAAGCG GGTGGTGCCG
GGCGACATCG TGCTGATGCA CGCCAGCGAC TCTTCGAAGC AGATCGTGGA GGCGCTGCCG
AGGATCGTCG AAAATCTGCG CCAGCAGGGG TATCGGTTTG TGACGGTATC CGAGCTCCTG
GCGGGCGCCA ACGTGCAGTC CAAAGTGCAG TGA
|
|---|
| Protein sequence | MRSFWKRLRA GVAALTAACV CAVSCMSLQA GSVRAADTKA QAPKAVYKVD TKEKVVALTF
DISWGHRTPE PVLETLKKCG VTKATFFLSG PWTMHHPEIA KKIKAMGYEI GSHGYLHKDY
SNYPDSWIRE QAMLADKAIQ QVTGVKPKLF RTPNGDLNLR VIRCLTSMGY TVVQWNTDSL
DWKNPGVDAI VNRVTKRVVP GDIVLMHASD SSKQIVEALP RIVENLRQQG YRFVTVSELL
AGANVQSKVQ
|
|---|
| |