Gene Aaci_2651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2651 
Symbol 
ID8426192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2731195 
End bp2732235 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content63% 
IMG OID645028778 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_003186044 
Protein GI258512610 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000206162 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCCCG TAATCCTGAA AACGCTTTTC GTCCAGCGCG AAGGTGCCAT CGTCCGCGTG 
CATCAGGACA CGGTAGTCGT CACGTTGGAG AATGAAACGC TTCTACGCGT GCCCATGCAC 
ATGGTGGATT CCATCGTCGG CATCGGCCGC GTGTCGTTCA CGAGTCCGCT CCTGGAGCGT 
TGCGCCGCCG AGGGGCGGTC CGTCGTTCGC ATGACGCGGG GAGGACGTTT CTTGTATCGC 
ATTGAGGGTC GGATGTCGGG CAATGTGCTC CTGCGCACCG CGCAGCATGA GGCGGCCCGC 
TCTCCCGAAC GATCGTTAAC GATCATGCGC GCGATTGTCG CGGGTAAAGT CCACAACCAG 
CGTCAACTCG TGCTAAAGGC CGCGCGCGAT CTCACTGCTC CTGCAGACCG TTCTTTCGTC 
CGCGAGGTGG CGGGCGATCT CGGACGTGAG CTTCGCAAGC TCCCGTCGGC CTCACATCCC 
GACGAAATCC GCGGTGTCGA GGGTGCGAGC GCACGCCGGT ACTTCATGGC ATTGCGACAT 
CTGATTGCTC CGGCCATTCG CGACGCACTG TCGTTTGACG GCCGCAATCG ACGGCCTCCG 
CGTGATCCCG TCAATGCTGT GTTGTCCTTC CTCTACGCGC TCATCACGCG AGACGCAGAG 
AGCGCGCTGC TTGGCGTGGG ACTCGATCCG CAGATTGGCT TTCTCCACAC GCTGCGCCCG 
GGCCGCCCGT CGCTCGCGCT CGATCTGGTT GAGGAAATGC GCCCAATTTT GGCCGATCGC 
GTGATGCTGT CGCTCTTCAA TCGCCGCCAA CTGCAGCCTT CCGATTTCGA GGTTCTGCCA 
GGAGGGGCGG TGGAACTCAC CGATTCGGGA AGGAGGACCC TTTTCGCCGA GTGGGACAGG 
CGCAAGCAGG TCGAGATCGA GCATCCCCTA CTGAAACAGC CGGTCGCGTA CGGACGGCTG 
CTTGACGTGC AGGCGAGGCT ACTCGCTCGC GCCATCCGCT CACCAGCACT CGGCTACACG 
CCGTTTCTCT ACCGAGGCTG A
 
Protein sequence
MPPVILKTLF VQREGAIVRV HQDTVVVTLE NETLLRVPMH MVDSIVGIGR VSFTSPLLER 
CAAEGRSVVR MTRGGRFLYR IEGRMSGNVL LRTAQHEAAR SPERSLTIMR AIVAGKVHNQ 
RQLVLKAARD LTAPADRSFV REVAGDLGRE LRKLPSASHP DEIRGVEGAS ARRYFMALRH 
LIAPAIRDAL SFDGRNRRPP RDPVNAVLSF LYALITRDAE SALLGVGLDP QIGFLHTLRP 
GRPSLALDLV EEMRPILADR VMLSLFNRRQ LQPSDFEVLP GGAVELTDSG RRTLFAEWDR 
RKQVEIEHPL LKQPVAYGRL LDVQARLLAR AIRSPALGYT PFLYRG