| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2620 |
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| Symbol | |
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| ID | 8426161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | + |
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| Start bp | 2696163 |
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| End bp | 2698562 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645028747 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s) |
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| Protein accession | YP_003186013 |
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| Protein GI | 258512579 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCACCCGG TTGCTCAGAC GTATATTCCG ATGCTCGTGA TCCTCTCCTA CGTCGTCGCA
TCGCTCGCCG CGTACGCCTC GCTCGATCTC GGCCGCCGCG TCCTGGAGAC GCGGGCGAAT
CGCCAGCTCG TCTGGGTCGT GCTGGGCGGC GTGGCGATGG GCATCGGCAT CTGGTCCATG
CACTTTGTGG CGATGCTCGC CCTGATGCTC CCTGCCCAGA TGACCTACAA CTGGGCCGTC
GTCGCGCTCT CCCTGGTCTT CGCCATGGCG GGCCCCGGGG CGGCGCTGTA CGTGGTGGCG
AGATCCGCGT CTCCGGTGAA ACTCGCGTAC GGGGCCCTGC TCATGGGCGC GGGCATCGTG
TTCATGCATT ACACGGGCAT GGCCGCCATG ACGGTGGAAG GCGGCGGCTT TTACTACCGC
GCCGGGCCGT TTGTGCTGTC GGTCGTGATC GCCATCGTCG CCTCGTATGT GGCGCTGTGG
CTCTCGTTCC GGCTGGCCAC GGCGCGAGGC TGGCTCGCGC AGGCGGCAAA GGTGGCGTGC
GCGCTCGTGA TGGGCATCGC CATCGCGGGC ATGCATTACA CCGGCATGTG GGCCACCGTC
TTCGTCCTGC CTGCCCATCG GCGAGCGGCG CCCATGGCGT ACAGCGGACC GCTCGCGCTG
GTCGTCGCCG TGTTCAGCGC GTTCATCCTG CTCGCCGCCA TCGCGACCGT GATGCTCGAC
CGGCGGCTGC AGGCGGACCG GCGCCGCCTC CGGCTCGCGG ACGAGCGATT TCGCTCGCTC
TACACGCACC ATTCGGACGC CATCTTCACG CTCGACACGC GCGGCGCCAT CGTCGACCAA
AATCCCCGCG CGAAGGAACT CGTGCCTGAG CACGAACTGC GGAAATCGGC CCGGGCGTTC
GCGCGCATGA TCGACCGGCG GGATCGGCCG CGGGTGTTCA AGGACTACCG GCGGGCGCTT
GGCGGCAGCA CCACGAACGG CGAGTTCCTG CTCCGGGCGG GAGATAGGGC GCTGCACATG
AGCGCCACGC ACATCCCCAT CGTGCTCGAC GACGAGATCG AGGGCGTGTT TCTGGTGGCG
CGCGACGTCA CGGCGGAGAA GGTGGCGGCC GAGCGCATGA ACTATCTTGC CTTTCACGAC
ACGCTGACGC AGCTCGCCAA CAGGCGCCAC TTCGAAGCGC GCGTGGACGA CTTTATCCGC
GACGCCCGCC CTGGCGACGA GATGCAGATT CTGTTTGTCG ATCTCGACCG GTTCAAATCG
GTCAATGACA CGCTAGGACA CGAGTTCGGA GACAAGCTGC TCCAGGAGAT TGCCCGCATC
CTGAAGGAGG TGGCCGGCGA GGATGCGCTC GTGGCCAGGA TGGGCGGCGA CGAATTCACC
ATCACGCTCT TCCGCCAGCC GATGGAGCGC GCCGTCGCCG TCGCGGACGC CATCCTGAAC
CGCCTGCGCA AACCCGTGCG CGTGGAGGAT CGCCCGCTGT ACATGACGGC GAGCGTCGGC
ATCGCGAGCT TCCCGCGGCA CGGCGTCACG CGCGACATGT TGCTCCGCCA CGCCGATCTC
GCCATGTACA CGGCGAAGGC CGAGGGGCGC AGCACGTACC GCCTGTTTGA AGAGCGCACG
GCGGCAAACG CGAAGAGCCG GCTGGAACTC GAACAGGAAC TCCGCACCGC GGCCCAGCGC
GGCGACTTCG AGATTCATTA CCAGCCGAAG ATCGACATGC GCCAAAAGGC CGTCGTCGGC
GTGGAGGCCT TGCTTCGCTG GCGCCGAGCG ACTGGCGAAT ACGTGCCGCC GTGCGAGTTC
ATCCCCATCG CCGAGGAGAC GGGCCTCATT GCGCCCATCG GGGAGTGGTG CCTGCGGGCC
GCATGCCGCC AAGCGAAGGC GTGGCTCGAC GCCGGCCGTC CGTTGAGCGT GGCGGTCAAC
CTGTCGCCGT ATCAGGTGCT CACCGACGGC TTCCTCGACG TGGTGCGCGA AGTCCTCGAC
GAGACCGGCC TGCCCGCGCA TTACCTCGAA ATTGAAGTGA CGGAGAGCGC CATGATGGAC
GCCGAGCGCG CCGAACGGTT TCTCGCCGGA TGCCAGGCGC TCGGCATCGA GGTGTCGCTC
GACGACTTCG GCACCGGCTA TAGCTCGCTG AGTCGCCTGA CGCACCTGCC GCTGAATGTC
GTCAAGATCG ATCGCGCCTT CACGCAGCGC GCGGTGGACG GGGGCCGTGC GCGCGCCCTG
GTGGCGAGCA TCGTGGACAT CGCACACAAT CTTGGCATGC GGTGCGTCGC GGAAGGCGTG
GAGACGAAGG AACAGTTGTC CGTCATCGAG GCCCTCGGAT GCGACGAGGC GCAGGGATTC
TACTTCGCCC GCCCCGTCCC CCCATCCGAT CTCGAAGCGC TCTCGATCAC GGCAGGATAA
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| Protein sequence | MHPVAQTYIP MLVILSYVVA SLAAYASLDL GRRVLETRAN RQLVWVVLGG VAMGIGIWSM
HFVAMLALML PAQMTYNWAV VALSLVFAMA GPGAALYVVA RSASPVKLAY GALLMGAGIV
FMHYTGMAAM TVEGGGFYYR AGPFVLSVVI AIVASYVALW LSFRLATARG WLAQAAKVAC
ALVMGIAIAG MHYTGMWATV FVLPAHRRAA PMAYSGPLAL VVAVFSAFIL LAAIATVMLD
RRLQADRRRL RLADERFRSL YTHHSDAIFT LDTRGAIVDQ NPRAKELVPE HELRKSARAF
ARMIDRRDRP RVFKDYRRAL GGSTTNGEFL LRAGDRALHM SATHIPIVLD DEIEGVFLVA
RDVTAEKVAA ERMNYLAFHD TLTQLANRRH FEARVDDFIR DARPGDEMQI LFVDLDRFKS
VNDTLGHEFG DKLLQEIARI LKEVAGEDAL VARMGGDEFT ITLFRQPMER AVAVADAILN
RLRKPVRVED RPLYMTASVG IASFPRHGVT RDMLLRHADL AMYTAKAEGR STYRLFEERT
AANAKSRLEL EQELRTAAQR GDFEIHYQPK IDMRQKAVVG VEALLRWRRA TGEYVPPCEF
IPIAEETGLI APIGEWCLRA ACRQAKAWLD AGRPLSVAVN LSPYQVLTDG FLDVVREVLD
ETGLPAHYLE IEVTESAMMD AERAERFLAG CQALGIEVSL DDFGTGYSSL SRLTHLPLNV
VKIDRAFTQR AVDGGRARAL VASIVDIAHN LGMRCVAEGV ETKEQLSVIE ALGCDEAQGF
YFARPVPPSD LEALSITAG
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