Gene Aaci_2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2571 
Symbol 
ID8426102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp2653117 
End bp2654544 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content72% 
IMG OID645028689 
Producthelix-turn-helix domain protein 
Protein accessionYP_003185964 
Protein GI258512530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.576414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGTGT CGATAGGAGA AACCATCCGA ACTCTCCGCA CAGCGCGCGG ACTGAGCCTG 
GCCGAACTGG CGGATGATCT CGCCAGCCCG GACCTGTTGG ACGAAATTGA ATCGGGCAGG 
GCCCTTGCGC CGTACCCGCT CCTCATCCGA GTGGCGGATC GCCTCGGCGA GCCCATCGAC 
AGATTGCTGG CCGACGTCGA TCCGCACGCC CTGCTCCAGG CGGCCATCCG CGTCGCCCAG 
TACGACGTGG CCGCAGGACA CCCTCATCGC GCACGCGACA TCCTCACGCA CCTGCCGGAG 
GCGTCGTTTC ACACGCGCAG CCTGAGCGAG TACCGGCTCA CGCTCGCGCG CGCCCTGCGA 
GGCCTCGGCG AAGAGGAAGA GGCGGTGGCG CTGCTCATCC CGCTCGCGGA GGCGGCGCAA 
AGCGCGGACG ACGCCCGCCT CGCGTTCTAC GCATTGCGGG AGCTCGGCTT TGCGGAGTGC 
GATCGCGGCA ACGTCCCCGG GGCCGTGCGC CTGTGGAAGG ACGCCCTCGC GCGCGTCGAC 
GCCCTCGCGG CCACGTACGC CGTTCCGTCA CACGAGCTCC ACGCGCTCGC CGTGGAGCTG 
TACCTCCACC TCGACGATCT CGACCCGCAC GCCGAGGGTT TCGACGTCCC GTGGCGGCGC 
TCGAGCTTCG ATCCGCAGCC GCGCCTGCGG GCCGAATTCG CACCGGCGGA CGCCGCCGCA 
CCGGTGTCCA AGCCCCCCTC GGCGCCTAAG GATCGGCCGT ACCTCGCCGC GGCCGAGCGG 
ATGGCCGCCT CCGCGCCGGC GCTTTTCGTC GTGGCCGAGG AACTTATCGC GGACGCGCTT 
CGCCACCTCG CCGTCGATCC GGCGCAGGCG AGGGCGCTCG CGGAGCAGGC GTCGACCCTG 
CTGTTTGTCG GGCGGCTCGC CGAGATCGAA GCGTCGCTCC ACGTGCGCCT GCTCGGGGCG 
GCCCCCGGCG CAGCCCGCTT GTCCACCCGG CTAGAGCGCG CGTACCTCAT GACCGCCGTC 
TCGCCCGGGC GGGATCTCGC CGCGTTTGCC GACGAGATTG CGCGGCAGTT GGACGACGGC 
GAGATCGACC GCGCGGCGAC CTTGCTCGAG AGCGCGCAGG CCATCGCGGC GGAGCTGCCG 
GACCTCGAGG ATCTCACCGC GAGGCGGGCG CGGCTCAAGC TCACCCTCCT CGACATGGAG 
GCCGCCTACG CCAAGCGGCC GCGCGAGCGC GCGTCGCTGC GCAAGCGGCT CATCGCCTAC 
GAGCAGTCGT TCCCCGAGTG GGGAGAGGCC GCCCTGCACC GCCGAGCCTG CCAGCTCCTC 
ATCCGCTGGC TCGCGGAGGC GCGCGACTTC GAAAGCGCGC TCCGGTACGT GCAGAAGCTC 
GACGCGTTGA GCCGCGAGCC TCGCCCGCCG GTTCCGTTCG TGTTCTGA
 
Protein sequence
MDVSIGETIR TLRTARGLSL AELADDLASP DLLDEIESGR ALAPYPLLIR VADRLGEPID 
RLLADVDPHA LLQAAIRVAQ YDVAAGHPHR ARDILTHLPE ASFHTRSLSE YRLTLARALR 
GLGEEEEAVA LLIPLAEAAQ SADDARLAFY ALRELGFAEC DRGNVPGAVR LWKDALARVD 
ALAATYAVPS HELHALAVEL YLHLDDLDPH AEGFDVPWRR SSFDPQPRLR AEFAPADAAA 
PVSKPPSAPK DRPYLAAAER MAASAPALFV VAEELIADAL RHLAVDPAQA RALAEQASTL 
LFVGRLAEIE ASLHVRLLGA APGAARLSTR LERAYLMTAV SPGRDLAAFA DEIARQLDDG 
EIDRAATLLE SAQAIAAELP DLEDLTARRA RLKLTLLDME AAYAKRPRER ASLRKRLIAY 
EQSFPEWGEA ALHRRACQLL IRWLAEARDF ESALRYVQKL DALSREPRPP VPFVF