Gene Aaci_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2569 
Symbol 
ID8426100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2650966 
End bp2652255 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content66% 
IMG OID645028687 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003185962 
Protein GI258512528 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCGT TTGCCATCGG GCTCGGCGTC GGGCTCGCCA TCGGCGCGCT GTTCGCGTTG 
TGGCAGATGA GCTGGTTTCG CAGCCTCAGG CGCTACCTGC TCGACGCCAT GGACGCCATC
GTCCAGGGCC GCTACGACGT GCGCATGTAC GAGTACCGGA GCCGCCCTGC CGAGATCGCC
ATTTTCCGCC ACTTCAACCG CATGGCCGAG CGCATCCAGG AGACGCTGGC GGATCTGTCG
CAGGAGCGAG ACATTCTCCG GCACATCCTG CAGAACATGA CCACCGGCGT CATCTACCTC
AGGAGCGACG GCCAGGTGCA GATGGTCAAT CACGCCGCCG AGCGGCTGTT CCGCCGGCCC
GTGGAGCAGT GGAAGGACCG AGATCACTGG ACCGTCTTTC GCAACTACCA GCTCGGCTCG
GCCATCGATC ACGCCCTTCT CTTCGGCACG CCCTGGTCCG GGGAGTTCCA GATCCGCGAC
GGCGTCACCG TGGCCGTGCG CCTCGTGCCC ATCTCCGCGG CGCCCCGCAT GCGGAACAAG
GCCGACGGTC GGCACGACGT GCTCATGTTG GTGAACGACG TCTCCGAGTG GCGCCGCCTC
GAGCGCATGC GGAGCGACTT CGTCGCCAAC GTCTCGCACG AGCTGAAGAC GCCCATCGCA
GCGATTCGCG GGTTCGCCGA GACGCTGCTT GACGGCGACG TGGACGAGGA GGCGCGCGAA
AAATTCCTGC GCACCATCTA TGAGGAGTCG CTCCGCATGG GCAACCTCGT GTCGGATCTG
CTCGAGCTCT CGAAGCTGGA GGCGAGCGAC AGCCACGTGG ACCCGGTCGC CGTCGATCTG
TACGAGGTGC TCGTGCGCGC CGTCGATCGC GTCCGGCCCG TGGCGAACGA AAAGGAGATC
ACCATCGAAC TGCCGCGCGA ACAACGCCTG CACGTCTGGG CCGAGCCGGA TCTCCTGCTG
CAGGTGTTTC TGAACCTGCT GACGAACGCC ATCCACTACT CGCCGCCGAA GAGCCGCGTC
TGCGTCACCT GGGACGTGCT GGTCGATCGC GTCAAGGTGC ACGTGAAGGA CAACGGCATC
GGGATCCCCA AGGAGTCGCT GCCGCGGGTG TTCGAGCGGT TTTACCGCGT GCACAAGGAC
CGCAGCCGGG CCTCCGGCGG GACGGGCCTT GGGCTCGCCA TCGTCAAGCA CATCGTCACC
GCGCTCGGCG GCGAGGTCGG CGTCGAGAGC GAGGAGGGCA AGGGCAGCGA CTTCTGGTTC
ACGCTCTCCA GGCTCGACGC GCGGCCGTGA
 
Protein sequence
MIPFAIGLGV GLAIGALFAL WQMSWFRSLR RYLLDAMDAI VQGRYDVRMY EYRSRPAEIA 
IFRHFNRMAE RIQETLADLS QERDILRHIL QNMTTGVIYL RSDGQVQMVN HAAERLFRRP
VEQWKDRDHW TVFRNYQLGS AIDHALLFGT PWSGEFQIRD GVTVAVRLVP ISAAPRMRNK
ADGRHDVLML VNDVSEWRRL ERMRSDFVAN VSHELKTPIA AIRGFAETLL DGDVDEEARE
KFLRTIYEES LRMGNLVSDL LELSKLEASD SHVDPVAVDL YEVLVRAVDR VRPVANEKEI
TIELPREQRL HVWAEPDLLL QVFLNLLTNA IHYSPPKSRV CVTWDVLVDR VKVHVKDNGI
GIPKESLPRV FERFYRVHKD RSRASGGTGL GLAIVKHIVT ALGGEVGVES EEGKGSDFWF
TLSRLDARP