Gene Aaci_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2505 
Symbol 
ID8426034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp2574547 
End bp2575548 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content63% 
IMG OID645028623 
ProductCollagen triple helix repeat protein 
Protein accessionYP_003185900 
Protein GI258512466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.987301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACAAC CCAATATCCC CAATATCAAT CCGTCCATCT CTATCACCCG GGACGACGCT 
GTCAACCTGT TGCTCTCGTC CATCGCGCTC GAGGAACTGG GACTTGGCCA CCTCACGAAC 
GCTGAGGCGG AAAAGATCCA GTACGTCCTC GGCACGCTGA CGGGTGCCAC CGGAACCCAG 
CCGTCGCTGG ATGACCTTCT CACGCTCAAT CAGTCGGTGA ACGCCACGTT GGACAACATC 
ATCCGCAAGG AGCTGATCTT GGACAGCAAG CTCAGCAACG TGATGTCGCT GGCGAACGTC 
GGACCGACCG GGCCCACAGG ACCGACCGGA CCCACAGGAC CGACCGGACC CACAGGACCG 
ACCGGACCCA CAGGACCGAC CGGACCCACA GGACCGACCG GACCCACAGG ACCGACCGGA 
CCCACAGGAC CGACGGGGCC CACAGGACCG ACAGGACCGA CGGGGCCAAC AGGCCCGGCT 
GGTTCAAGCG CGATCATTCC GTTCGCGTCT GGCCTGCCCG TGGCTCTCAC CACCGTCGCA 
GGTGGCCTCG TCGGGACGAC GAGCCTAGTC GGCTTTGGCA GCTCGGTCAC AGGAGTGACC 
GTGCTGGGCA GTGGCCAGAT CGACCTCACC GGAGCTGGCG GCACGCTCCT GAACTTCGCC 
TTCTCGATGC CGCGCGATGG CGTCATCACG TCGATCGCAG CGTACTTTAG TGCGACGGCC 
GCGCTCAGCC TGCTCGGCAC GACCGTGAAC ATCACGGCGC AGCTGTACGA GTCGACAACG 
CCGAACAACA CATTTTCACC GATCCCAGGC GCTTCCGTCG CTCTGCCGCC GCTCACCGGT 
ACAATCTCCA TTGGACAAAT CGTGAGCGGT ATTACAACCG GCCTGTCGAT CCCCGTGACA 
GCAGGCACGC GCCTCCTGCT CGTCTTCTCG GCGACGGCGT CGGGTCTCTC GCTGATTAAC 
ACCGTTGTCG GTTACGCTTC TGCGGGCGTT GCGATCAGTT AA
 
Protein sequence
MSQPNIPNIN PSISITRDDA VNLLLSSIAL EELGLGHLTN AEAEKIQYVL GTLTGATGTQ 
PSLDDLLTLN QSVNATLDNI IRKELILDSK LSNVMSLANV GPTGPTGPTG PTGPTGPTGP 
TGPTGPTGPT GPTGPTGPTG PTGPTGPTGP TGPTGPTGPA GSSAIIPFAS GLPVALTTVA 
GGLVGTTSLV GFGSSVTGVT VLGSGQIDLT GAGGTLLNFA FSMPRDGVIT SIAAYFSATA 
ALSLLGTTVN ITAQLYESTT PNNTFSPIPG ASVALPPLTG TISIGQIVSG ITTGLSIPVT 
AGTRLLLVFS ATASGLSLIN TVVGYASAGV AIS