| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2484 |
|---|
| Symbol | |
|---|
| ID | 8426013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2553983 |
|---|
| End bp | 2554675 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645028602 |
|---|
| Product | Thiamine-phosphate diphosphorylase |
|---|
| Protein accession | YP_003185879 |
|---|
| Protein GI | 258512445 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.336638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATG TGCTCCATGT GCTGAGTGAT CGCGCCCGCG GCGCGAAGGT TCCGCTCAAA
GACGCGCTGT GGCTTGCGGC CTTGGGCGGG GCCGACGTGA TTCAGGTCCG GGAGAAGAAG
GCGCCGGCTC TCGCCGTGTT CGAATTCGCG TGTGCGCTTT TGGCGCGGAT CCGCGAGGCG
GGATCGAGCG CGCGCGTGTT GGTGAACGAC CGCCTGGACG TGGCGATGGC GGCGCGCGCG
GACGGCGTGC ATCTGGCGGC CAAGTCGCTG CCGGTGGCGG CGGCGCGCGA GGTGGTGCAG
CGCGCGGGCG GCGGGCTTGT CCTCGGCTGC TCCGTGCATT CGCTGGAGGA AGCGCAGGCT
GCTGAGGCCG CGGGCGCGGA CTACGTCACG TTCGGCCATA TCTTCCCGAC CGCGTCTCAC
CCGGGTCTGC CGCCGAAGGG CGTGCGGGAG CTCGCCCGGG TCGTCGAGGC GGTGTCCATC
CCCGTGGTGG CCATTGGCGG GATCGACGCG GGAAACGTAA CCGAGGTGTT GGCGACCGGC
GCGAGCGGCG TGGCCGTGAT CGGCGCGGTG GTGGAGGCCG CGGATCCGCG CGCGGCCGCG
GCTCGGCTCA AGGAGGCGAT GGCGAGATCG CCCGTGGCGC CGAAGGTTCC GTTTCCAACG
CCGGAAGGGG GGATGCGGCG TGCGCGCCTA TGA
|
|---|
| Protein sequence | MTHVLHVLSD RARGAKVPLK DALWLAALGG ADVIQVREKK APALAVFEFA CALLARIREA
GSSARVLVND RLDVAMAARA DGVHLAAKSL PVAAAREVVQ RAGGGLVLGC SVHSLEEAQA
AEAAGADYVT FGHIFPTASH PGLPPKGVRE LARVVEAVSI PVVAIGGIDA GNVTEVLATG
ASGVAVIGAV VEAADPRAAA ARLKEAMARS PVAPKVPFPT PEGGMRRARL
|
|---|
| |