Gene Aaci_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2472 
Symbol 
ID8426001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2540181 
End bp2541071 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content62% 
IMG OID645028590 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003185867 
Protein GI258512433 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCATCG CGGTAACCCA GCCTCAGGCG CCGGCGCGGC GTGCGAGGCG CAACTCACCC 
ATGTATCGCG CCTGGCAGCG ATATCGAAAG AATTGGTTTG CCGTGGCGGG ACTCATTTGG
GTCATCCTCT TTTTCATCAT CGGTATCATC GGCCCGTGGA TCGCGCCCTA CAGCTACACG
TACGCGGACT TTCTCCATAT GCACTCGGGT CCTTCTTGGC AGCATTGGTT CGGCACGGAT
ACGGTCGGAT ACGACGTCTT CAGCCAGATC CTCTATAGCA TCCGGTACGC GCTGGAGATT
GCGCTCGGCG CCACGTGCGT CAGCTTTTTG ATCGGCGTCA TTCTGGGACT CTGGGCCGGG
CTTGCCGGCG GCATCATCGA CATCATCGTC ATGCGCGCCG TCGACTTTAT GTTCGCGCTC
CCGTCGTTCT TCTTCGCCCT GATCCTGATG GTGCTTCTCG GCAAGGGCAT CTTCCCGATG
ATCTTGGCCA TCGGCGTCCC GGGGTGGGCA GGATACGCGC GCCTCATCCG CTCGCTCGTG
CTGGCGATGC GAAACGGCGA GATGGTGGAG GCCGCCCGGG CGCTGGGGGC GTCGCAGTGG
CACATCGCGC GAAAGTACAT GTTCCCGAAC GTCGTGGGCA GCATGGTGGT CTCGCTCGCC
TTCGGCATTC CGTACGATCT CACCGCGCAA GCGGGGCTCA GCATCGTGGG CATGGGCCTC
AATCCGCCGA TGCCGTCGTT CGGCAACATG CTCGCGCAGG CGGGGGCGAA CATCCTGGGC
TTCCCTTGGC TTCTCTATTT TCCGGCCGGC GTGTTCGCCA TCACCTTGTT GTCGTTTCTA
TTCGTGGCCG ACGGCCTGCA GGAAGCGTTC AATCCGAAAG GAGGCGTGTG A
 
Protein sequence
MAIAVTQPQA PARRARRNSP MYRAWQRYRK NWFAVAGLIW VILFFIIGII GPWIAPYSYT 
YADFLHMHSG PSWQHWFGTD TVGYDVFSQI LYSIRYALEI ALGATCVSFL IGVILGLWAG
LAGGIIDIIV MRAVDFMFAL PSFFFALILM VLLGKGIFPM ILAIGVPGWA GYARLIRSLV
LAMRNGEMVE AARALGASQW HIARKYMFPN VVGSMVVSLA FGIPYDLTAQ AGLSIVGMGL
NPPMPSFGNM LAQAGANILG FPWLLYFPAG VFAITLLSFL FVADGLQEAF NPKGGV