Gene Aaci_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2447 
Symbol 
ID8425976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2510914 
End bp2512002 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID645028565 
Productisopentenyl-diphosphate delta-isomerase, type 2 
Protein accessionYP_003185842 
Protein GI258512408 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID[TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGCGAG ACGTCCGGCA GCGGCGCAAG GTCGAGCACG TGCATGCCGT TCAAGCGCTC 
GGCGATCCGA CGGGCGTCTC GAACGGGTTC GAGTGCGTCT CGCTCGTGCC TTGCTCCGCG 
CCGGAGGTGG CTTGGGACGA CGTGTCCCTG GCCACCCAGC TCTGCGGCAT CCGCCTGGAA 
TCGCCGATCA TCATCAACGC GATGACGGGC GGTGCCGACG AAGTGTACGA CATCAATCGC 
AAGCTCGCGC AGGTCGCGCG CCGCTTCGGC CTGGCCATGG CGCTCGGTTC CGCTTCGGCC 
GGCCTCGCCT CTCCCGAGGT GGCGTACACG TACCGCGTGG TGCGGGAGAT CCATCAGGAC 
GGCGTGGTCA TTGCCAACGT GGGCATGGGC ACGCGCCTGG AGCGCGCGCG GCAGGCCGTC 
GAGTTGGTGC GGGCGGATCT GCTTCAGGTC CACTTCAACG CCGCGCAGGA GCTGTTCATG 
GCGGAAGGGG ATCGCGACTT TCGCGGCGCG CTCGAGGCGC TTGCGGAAGT CGCGCGCGGC 
GTGGGCGTCC CGGTGGTGGC CAAGGAGGTC GGGCAAGGGA TTTCGGCCGA AGATGCCATC 
CGGTTTGCGG ACGCCGGCGT GCGCGCCATC GACGTGGGCG GCCTCGGCGG GACGAATTTC 
ATCACGGTCG AAGCCTGGCG GCGAGGCGCC GAGATCGACG ATTTTTGGCA TCGGTGGGGC 
CTGCCGACGG CCGCATCGCT GTGCGAAGTC GCGGCGGCGG TCGGGGGACG CGCCGACGTC 
ATTGCGTCCG GAGGCATCCG CACGGCGCTC GACGTCGCGA AGGCCATGGC GCTCGGCGCG 
AGCGCGGTCG GCATCGCGGG GCCGCTCGTC CAACTGGTGA CGCAGCCGAA CGGGGAAGAG 
CAGCTAAATC GTTTTATTGA GGACCTTCAC TTCGGGCTCC GAGCCCTGCT GGTGCTCACC 
GGGTGCCGCA ATTTCTCCGA TTTGCGCGGC AAGCCCGTCG TCATCCTGGG ATGGCTCCGG 
GAATGGCTCG AGGCGCGGGG GCTGAAGGCG TGGATGGACG CGCGGGGGCG GGCTCCGCTC 
GGCGCGTGA
 
Protein sequence
MTRDVRQRRK VEHVHAVQAL GDPTGVSNGF ECVSLVPCSA PEVAWDDVSL ATQLCGIRLE 
SPIIINAMTG GADEVYDINR KLAQVARRFG LAMALGSASA GLASPEVAYT YRVVREIHQD 
GVVIANVGMG TRLERARQAV ELVRADLLQV HFNAAQELFM AEGDRDFRGA LEALAEVARG 
VGVPVVAKEV GQGISAEDAI RFADAGVRAI DVGGLGGTNF ITVEAWRRGA EIDDFWHRWG 
LPTAASLCEV AAAVGGRADV IASGGIRTAL DVAKAMALGA SAVGIAGPLV QLVTQPNGEE 
QLNRFIEDLH FGLRALLVLT GCRNFSDLRG KPVVILGWLR EWLEARGLKA WMDARGRAPL 
GA