Gene Aaci_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2444 
Symbol 
ID8425973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2508195 
End bp2509184 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID645028562 
Producthopanoid-associated sugar epimerase 
Protein accessionYP_003185839 
Protein GI258512405 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR03466] hopanoid-associated sugar epimerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCGT TCGTGACCGG AGGATCCGGC TTTGTGGGCT ATCACGTCGC CCGGGTGCTG 
GTCGAGCACG GCCACCGCGT GCGCGCGTTG GTGCGCCATC CCGGCCGCGC CCCACATCTC 
AAGGCGCTCG GCGTGGAGAT GATTCAAGGC GATCTCGCCA CCGGAGACGG TTTGCGCGCC 
GGGATCGACG GCTGCGACGC CGTGTTTCAC GTGGCGGCGC ACTACTCGCT CGATCCGCAC 
GACGACGCGC TGATGTACGC GGCCAACGTG GAGGGGACGC GCCGCGTGCT TCAGGCGGTC 
CGCGAGGCCG GCGGCCCGCG GCTCGTCTAC ACGAGTTCCA CCGCGGCGGT CAAGCTGAGA 
CATGACGGCC AGCCTGCGAC CGAGGCGGAC GGCTTCAACG ATCCCGACCG CGTCGTGAGC 
ACGTACAAGC GGACCAAGGT GCTCGCCGAG CGCCTGGTGA TGCAGGCGGC CGCCGAGGGC 
ATGGACGTGG TCATCGTCAA TCCGTCCACG CCGGTCGGCC CGTACGACGT GAAGCCGACG 
CCGACGGGCC GCATTGTGCT CGACACGATG TTGGGCAGGA TGCCCGGGTA CGTGGAGACG 
GGGCTGAACC TCGTGGCGGT GGAGGACGTG GCCATCGGCC ACCTGCTCGC GTACGAGCGG 
GGGCGCGCGG GCGAGCGGTA CATTCTCGGC AACCGGAACA TGCACTTCGG GGAGTTGGTC 
CGGCTCATCG CGGAGCTCGC CGGACAGAAA CCTCCGCGGC TCAGGATCCC CTTTTTCGCG 
GCCATGGCGT ACGCCGTGAT CGACGAGCGG GTTCTGGCGC CGCTCATGAA GCGGCCGGCG 
CGGGCGCCGG TGGCCGGCGT GCGGCTTGCG AGGGAGCCGA TGTACTTCGA CGCGTCCAAG 
GCGGTGCGGG AGCTCGGGCT TCCGCAGTCG CCGGTGGAGG ATGCGCTGCT TCGCGCCATC 
GAATGGTTTC GGAGCGCCAA GATGGCGTGA
 
Protein sequence
MLAFVTGGSG FVGYHVARVL VEHGHRVRAL VRHPGRAPHL KALGVEMIQG DLATGDGLRA 
GIDGCDAVFH VAAHYSLDPH DDALMYAANV EGTRRVLQAV REAGGPRLVY TSSTAAVKLR 
HDGQPATEAD GFNDPDRVVS TYKRTKVLAE RLVMQAAAEG MDVVIVNPST PVGPYDVKPT 
PTGRIVLDTM LGRMPGYVET GLNLVAVEDV AIGHLLAYER GRAGERYILG NRNMHFGELV 
RLIAELAGQK PPRLRIPFFA AMAYAVIDER VLAPLMKRPA RAPVAGVRLA REPMYFDASK 
AVRELGLPQS PVEDALLRAI EWFRSAKMA