| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2443 |
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| Symbol | |
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| ID | 8425972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2506260 |
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| End bp | 2508155 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645028561 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_003185838 |
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| Protein GI | 258512404 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.78759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGC AGTTGGTGGA AGCGCCGGCC TACGCGCGGA CGCTGGATCG CGCGGTGGAG
TATCTCCTCT CCTGCCAAAA GGACGAAGGC TACTGGTGGG GGCCGCTTCT GAGCAACGTC
ACGATGGAAG CGGAGTACGT CCTCTTGTGC CACATTCTCG ATCGCGTCGA TCGGGATCGC
ATGGAGAAGA TCCGGCGGTA CCTGTTGCAC GAGCAGCGCG AGGACGGCAC GTGGGCCCTG
TACCCGGGTG GGCCGCCGGA CCTCGACACG ACCATCGAGG CGTACGTCGC GCTCAAGTAT
ATCGGCATGT CGCGCGACGA GGAGCCGATG CAGAAGGCGC TCCGGTTCAT TCAGAGCCAG
GGCGGGATCG AGTCGTCGCG CGTGTTCACG CGGATGTGGC TGGCGCTGGT GGGAGAATAT
CCGTGGGAGA AGGTGCCCAT GGTCCCGCCG GAGATCATGT TCCTCGGCAA GCGCATGCCG
CTCAACATCT ACGAGTTTGG CTCGTGGGCT CGGGCGACCG TCGTGGCGCT CTCGATTGTG
ATGAGCCGCC AGCCGGTGTT CCCGCTGCCC GAGCGGGCGC GCGTGCCCGA GCTGTACGAG
ACCGACGTGC CTCCGCGCCG GCGCGGCGCC AAGGGAGGGG GTGGGTGGAT CTTCGACGCG
CTCGACCGGG CGCTGCACGG GTATCAGAAG CTGTCGGTGC ACCCGTTCCG CCGCGCGGCC
GAGATCCGCG CCTTGGACTG GTTGCTCGAG CGCCAGGCCG GAGACGGCAG CTGGGGCGGG
ATTCAGCCGC CTTGGTTTTA CGCGCTCATC GCGCTCAAGA TTCTCGACAT GACGCAGCAT
CCGGCGTTCA TCAAGGGCTG GGAAGGTCTA GAGCTGTACG GCGTGGAGCT GGATTACGGA
GGATGGATGT TTCAGGCTTC CATCTCGCCG GTGTGGGACA CGGGCCTCGC CGTGCTCGCG
CTGCGCGCTG CGGGGCTTCC GGCCGATCAC GACCGCTTGG TCAAGGCGGG CGAGTGGCTG
TTGGACCGGC AGATCACGGT TCCGGGCGAC TGGGCGGTGA AGCGCCCGAA CCTCAAGCCG
GGCGGGTTCG CGTTCCAGTT CGACAACGTG TACTACCCGG ACGTGGACGA CACGGCCGTC
GTGGTGTGGG CGCTCAACAC CCTGCGCTTG CCGGACGAGC GCCGCAGGCG GGACGCCATG
ACGAAGGGAT TCCGCTGGAT TGTCGGCATG CAGAGCTCGA ACGGCGGTTG GGGCGCCTAC
GACGTCGACA ACACGAGCGA TCTCCCGAAC CACATCCCGT TCTGCGACTT CGGCGAAGTG
ACCGATCCGC CGTCAGAGGA CGTCACCGCC CACGTGCTCG AGTGTTTCGG CAGCTTCGGG
TACGATGACG CCTGGAAGGT CATCCGGCGC GCGGTGGAAT ATCTCAAGCG GGAGCAGAAG
CCGGACGGCA GCTGGTTCGG TCGTTGGGGC GTCAATTACC TCTACGGCAC GGGCGCGGTG
GTGTCGGCGC TGAAGGCGGT CGGGATCGAC ACGCGCGAGC CGTACATTCA AAAGGCGCTC
GACTGGGTCG AGCAGCATCA GAACCCGGAC GGCGGCTGGG GCGAGGACTG CCGCTCGTAC
GAGGATCCGG CGTACGCGGG TAAGGGCGCG AGCACCCCGT CGCAGACGGC CTGGGCGCTG
ATGGCGCTCA TCGCGGGCGG CAGGGCGGAG TCCGAGGCCG CGCGCCGCGG CGTGCAATAC
CTCGTGGAGA CGCAGCGCCC GGACGGCGGC TGGGATGAGC CGTACTACAC CGGCACGGGC
TTCCCAGGGG ATTTCTACCT CGGCTACACC ATGTACCGCC ACGTGTTTCC GACGCTCGCG
CTCGGCCGCT ACAAGCAAGC CATCGAGCGC AGGTGA
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| Protein sequence | MAEQLVEAPA YARTLDRAVE YLLSCQKDEG YWWGPLLSNV TMEAEYVLLC HILDRVDRDR
MEKIRRYLLH EQREDGTWAL YPGGPPDLDT TIEAYVALKY IGMSRDEEPM QKALRFIQSQ
GGIESSRVFT RMWLALVGEY PWEKVPMVPP EIMFLGKRMP LNIYEFGSWA RATVVALSIV
MSRQPVFPLP ERARVPELYE TDVPPRRRGA KGGGGWIFDA LDRALHGYQK LSVHPFRRAA
EIRALDWLLE RQAGDGSWGG IQPPWFYALI ALKILDMTQH PAFIKGWEGL ELYGVELDYG
GWMFQASISP VWDTGLAVLA LRAAGLPADH DRLVKAGEWL LDRQITVPGD WAVKRPNLKP
GGFAFQFDNV YYPDVDDTAV VVWALNTLRL PDERRRRDAM TKGFRWIVGM QSSNGGWGAY
DVDNTSDLPN HIPFCDFGEV TDPPSEDVTA HVLECFGSFG YDDAWKVIRR AVEYLKREQK
PDGSWFGRWG VNYLYGTGAV VSALKAVGID TREPYIQKAL DWVEQHQNPD GGWGEDCRSY
EDPAYAGKGA STPSQTAWAL MALIAGGRAE SEAARRGVQY LVETQRPDGG WDEPYYTGTG
FPGDFYLGYT MYRHVFPTLA LGRYKQAIER R
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