Gene Aaci_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2428 
Symbol 
ID8425957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2488624 
End bp2490309 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content63% 
IMG OID645028546 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003185823 
Protein GI258512389 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0683901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCG GAGAGACCAT CGCCGGCCGC CCGCCTGAGC CAGGGCCCGG CGGGCCCACG 
GGTGAGCCGG TGTTGCACAA GGGGCCCATC CTGTTTTCGC TCATCCTGGG TGCGTTTGCG
GCCATCCTCA ATCAGACGCT TCTGAACGTG GCCGTGCCCA AGCTGATGGC CGACTTCAAC
GTGTCGGCGA GCACCGTGCA GTGGCTTTCG ACTGGGTACC TGCTGACGAA CGGCATCGTC
ATTCCGATGA CGGCGTTTCT CATCGGCACG TTCACCACGC GCCAGCTGTT TCTCGGGGCC
ATGTTCCTGT TTGGCGTCGG GACGCTCCTG TGCGCGCTGG CGCCCGACTT CCCAGTGATG
CTCGTCGGAC GGATCGTGCA GGCGGCCGGC GCGGGGATCA TGATGCCGCT CATGATGACC
GTGATTCTCA ACCTGTATCC GCCGGAGACG CGCGGCCGCG CCATGGGCAC CATCGGCATC
GCGATGTTCT TTGCCCCCGC GGTCGGCCCG ACGCTGTCTG GCTGGATTGT GCAGAACTAC
TCGTGGCGGG TGCTGTTTTA CATCGTGCTG CCCGTCGCCG TGATCGATCT CGTCGTGGCC
TCCATCTTCC TCAAAAACGT CACCGAGCGG ACGTTTCCGA AGTTCGAGTT TTGGAGCTTC
GTGGCGTCCA CCATTGGGTT GGGTTCGCTT CTGTATGGCT TCAGCGAGGC GGGCAACAAG
GAATGGGGCG CTACGGAGGT GGTGGCGAGC ATCGCGGTGG GCGTGGTGTT CCTCATCTTG
TTTGTGGTGC GGGAGCTCAC GTCGGCTCAT CCGCTCTTGA ACCTGCGGGT GTTTCGATAC
GGCGGATTCA CCATCGCCGC GGTCGTGAGC TGTGTGGCGA ACATGGCCAT GTTTGGCGGA
TCGCTCCTCA CGCCCATCTA CGTGCAGGAC GTCCGCGGCT ATTCGGCGCT CGATTCGGGT
TTGATCCTGT TGCCGGGAGC TATTCTGATG GGCATCATGT CGCCCATCTC CGGCGCGCTG
CTCGATAAAA TTGGGATTCG CCCGCTCGCC ATCGTGGGAC TTATCATCAC GGTTGTCACG
ACGTGGGAGC TCGGTCGCGT CAACCTGCAG ACGCCGCTTG GCGACATCAT GTGGATCTAC
ACGCTTCGCA TGTTTGGGCT GAGTTTCATC ATGATGACCA TCATGACGGC GGGGTTGAAC
CACCTGCCGC GGCAGTACAA CAGCCACGGC ACGGCGGCGG CCAACACAGT GCGCACCATT
GCGGCGTCGC TCGGCACCTC GCTTCTCATC ACCATCATGA CGGATCGGTC CAACATGCAC
TACCAGCAAC TGGTCACTTC GGTGCAGACG AACAACCCGT TCCTGAACAT CACGCTGTCC
CAGTTCGCGC ATGCGCTCGC CGCGATGGCG CCGATGACCG CACAACAGGC GAATGCCCTC
GTGACGTACC TGCTCTATGG TCAGGCGCAG CTTCTCGCCG CGGTCGAGGG CATCGATGAC
AGCTTCCTCG TGGCAGCGGG CATCGCGCTC GTCGCGCTGG TGTTGTCGCT CTTCTTGCGC
AACGTGAAGC GGGCGAGAGC GTCCGCTCCG GCGCCTGCGG AAGGGACCCC GCCGGCCGTG
ATGGAGGGCA CTCGCCGCAA GGTGGCCGTC CTCCGCAGGA CGCTTCGCCC GCGGCCCGAG
GGATGA
 
Protein sequence
MNGGETIAGR PPEPGPGGPT GEPVLHKGPI LFSLILGAFA AILNQTLLNV AVPKLMADFN 
VSASTVQWLS TGYLLTNGIV IPMTAFLIGT FTTRQLFLGA MFLFGVGTLL CALAPDFPVM
LVGRIVQAAG AGIMMPLMMT VILNLYPPET RGRAMGTIGI AMFFAPAVGP TLSGWIVQNY
SWRVLFYIVL PVAVIDLVVA SIFLKNVTER TFPKFEFWSF VASTIGLGSL LYGFSEAGNK
EWGATEVVAS IAVGVVFLIL FVVRELTSAH PLLNLRVFRY GGFTIAAVVS CVANMAMFGG
SLLTPIYVQD VRGYSALDSG LILLPGAILM GIMSPISGAL LDKIGIRPLA IVGLIITVVT
TWELGRVNLQ TPLGDIMWIY TLRMFGLSFI MMTIMTAGLN HLPRQYNSHG TAAANTVRTI
AASLGTSLLI TIMTDRSNMH YQQLVTSVQT NNPFLNITLS QFAHALAAMA PMTAQQANAL
VTYLLYGQAQ LLAAVEGIDD SFLVAAGIAL VALVLSLFLR NVKRARASAP APAEGTPPAV
MEGTRRKVAV LRRTLRPRPE G