Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2428 |
Symbol | |
ID | 8425957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2488624 |
End bp | 2490309 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645028546 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003185823 |
Protein GI | 258512389 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0683901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGCG GAGAGACCAT CGCCGGCCGC CCGCCTGAGC CAGGGCCCGG CGGGCCCACG GGTGAGCCGG TGTTGCACAA GGGGCCCATC CTGTTTTCGC TCATCCTGGG TGCGTTTGCG GCCATCCTCA ATCAGACGCT TCTGAACGTG GCCGTGCCCA AGCTGATGGC CGACTTCAAC GTGTCGGCGA GCACCGTGCA GTGGCTTTCG ACTGGGTACC TGCTGACGAA CGGCATCGTC ATTCCGATGA CGGCGTTTCT CATCGGCACG TTCACCACGC GCCAGCTGTT TCTCGGGGCC ATGTTCCTGT TTGGCGTCGG GACGCTCCTG TGCGCGCTGG CGCCCGACTT CCCAGTGATG CTCGTCGGAC GGATCGTGCA GGCGGCCGGC GCGGGGATCA TGATGCCGCT CATGATGACC GTGATTCTCA ACCTGTATCC GCCGGAGACG CGCGGCCGCG CCATGGGCAC CATCGGCATC GCGATGTTCT TTGCCCCCGC GGTCGGCCCG ACGCTGTCTG GCTGGATTGT GCAGAACTAC TCGTGGCGGG TGCTGTTTTA CATCGTGCTG CCCGTCGCCG TGATCGATCT CGTCGTGGCC TCCATCTTCC TCAAAAACGT CACCGAGCGG ACGTTTCCGA AGTTCGAGTT TTGGAGCTTC GTGGCGTCCA CCATTGGGTT GGGTTCGCTT CTGTATGGCT TCAGCGAGGC GGGCAACAAG GAATGGGGCG CTACGGAGGT GGTGGCGAGC ATCGCGGTGG GCGTGGTGTT CCTCATCTTG TTTGTGGTGC GGGAGCTCAC GTCGGCTCAT CCGCTCTTGA ACCTGCGGGT GTTTCGATAC GGCGGATTCA CCATCGCCGC GGTCGTGAGC TGTGTGGCGA ACATGGCCAT GTTTGGCGGA TCGCTCCTCA CGCCCATCTA CGTGCAGGAC GTCCGCGGCT ATTCGGCGCT CGATTCGGGT TTGATCCTGT TGCCGGGAGC TATTCTGATG GGCATCATGT CGCCCATCTC CGGCGCGCTG CTCGATAAAA TTGGGATTCG CCCGCTCGCC ATCGTGGGAC TTATCATCAC GGTTGTCACG ACGTGGGAGC TCGGTCGCGT CAACCTGCAG ACGCCGCTTG GCGACATCAT GTGGATCTAC ACGCTTCGCA TGTTTGGGCT GAGTTTCATC ATGATGACCA TCATGACGGC GGGGTTGAAC CACCTGCCGC GGCAGTACAA CAGCCACGGC ACGGCGGCGG CCAACACAGT GCGCACCATT GCGGCGTCGC TCGGCACCTC GCTTCTCATC ACCATCATGA CGGATCGGTC CAACATGCAC TACCAGCAAC TGGTCACTTC GGTGCAGACG AACAACCCGT TCCTGAACAT CACGCTGTCC CAGTTCGCGC ATGCGCTCGC CGCGATGGCG CCGATGACCG CACAACAGGC GAATGCCCTC GTGACGTACC TGCTCTATGG TCAGGCGCAG CTTCTCGCCG CGGTCGAGGG CATCGATGAC AGCTTCCTCG TGGCAGCGGG CATCGCGCTC GTCGCGCTGG TGTTGTCGCT CTTCTTGCGC AACGTGAAGC GGGCGAGAGC GTCCGCTCCG GCGCCTGCGG AAGGGACCCC GCCGGCCGTG ATGGAGGGCA CTCGCCGCAA GGTGGCCGTC CTCCGCAGGA CGCTTCGCCC GCGGCCCGAG GGATGA
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Protein sequence | MNGGETIAGR PPEPGPGGPT GEPVLHKGPI LFSLILGAFA AILNQTLLNV AVPKLMADFN VSASTVQWLS TGYLLTNGIV IPMTAFLIGT FTTRQLFLGA MFLFGVGTLL CALAPDFPVM LVGRIVQAAG AGIMMPLMMT VILNLYPPET RGRAMGTIGI AMFFAPAVGP TLSGWIVQNY SWRVLFYIVL PVAVIDLVVA SIFLKNVTER TFPKFEFWSF VASTIGLGSL LYGFSEAGNK EWGATEVVAS IAVGVVFLIL FVVRELTSAH PLLNLRVFRY GGFTIAAVVS CVANMAMFGG SLLTPIYVQD VRGYSALDSG LILLPGAILM GIMSPISGAL LDKIGIRPLA IVGLIITVVT TWELGRVNLQ TPLGDIMWIY TLRMFGLSFI MMTIMTAGLN HLPRQYNSHG TAAANTVRTI AASLGTSLLI TIMTDRSNMH YQQLVTSVQT NNPFLNITLS QFAHALAAMA PMTAQQANAL VTYLLYGQAQ LLAAVEGIDD SFLVAAGIAL VALVLSLFLR NVKRARASAP APAEGTPPAV MEGTRRKVAV LRRTLRPRPE G
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