| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2342 |
|---|
| Symbol | |
|---|
| ID | 8425871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2405366 |
|---|
| End bp | 2406025 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645028461 |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_003185738 |
|---|
| Protein GI | 258512304 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000870082 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA CTTCGGGCGG AAAGCCGAAG CGGCCATTCT TCCTCTCGCT GAGCCTTCGC
CAGCTCATCG CGGGGGTTCT GCTCGTCGCC GTCCTGGTGA CCATCTCGAC GAACGGCTTC
TGGCGGTTGA TGTATCCCAT CCAGTACCAG GCCCAAATCC AGCAGTCGGC TCGGTTTGCG
GACGTGGATC CGCTGCTCAT CGCGAGCATC ATCCGGGTGG AGAGCAAGTT TCGGACCGAG
GACGTCTCGC ACGCGGGCGC CGTGGGGCTG ATGCAGCTCA TGCCGCAGAC GGCCGAGTGG
ATCGCGGAGA TGCTTCGGAA TCAGACGTCG GGATCGGGCG GCGCCCTCCG CAAGCTGCCG
AAGGATGCGA AAAAACTCGC GAGCCCCGAG TACAACATCC TGATTGGCAG TTGGTACGTG
AAAAGTCTGA TCGACGATTT CCATGGCAAC GTGGTGGCGG CGGTCGCGGC GTACAACGCG
GGCCCGCGGC GCGTGTCGCA ATGGCTGAAG GACGGGGTGT GGAACGGGAA GCTTCAGGAC
ATCGATCAGA TCCCCGTCGG GGAGACGCGC CACTTCGTCG ATCGCGTCTT TTACAACTAT
GATTTGTACA AAAAAATCTA CGGGGGAGAT CCCGCCTGGC GCTTGTCTGC GAACGGTTAG
|
|---|
| Protein sequence | MAKTSGGKPK RPFFLSLSLR QLIAGVLLVA VLVTISTNGF WRLMYPIQYQ AQIQQSARFA
DVDPLLIASI IRVESKFRTE DVSHAGAVGL MQLMPQTAEW IAEMLRNQTS GSGGALRKLP
KDAKKLASPE YNILIGSWYV KSLIDDFHGN VVAAVAAYNA GPRRVSQWLK DGVWNGKLQD
IDQIPVGETR HFVDRVFYNY DLYKKIYGGD PAWRLSANG
|
|---|
| |