| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2310 |
|---|
| Symbol | |
|---|
| ID | 8425838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 2373896 |
|---|
| End bp | 2375563 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645028429 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003185707 |
|---|
| Protein GI | 258512273 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1457] Purine-cytosine permease and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAC TGCAACCTGA ACGCGGGCGG CCCACGCCCA AGCGCACCTT TAATCGCTGG
GTGCAAAATC CGGTCCTTGA GGACTACGCG CTGCGGTACG CCCCCAAGTC GTTTCGCCTG
TGGAGCGAGT GGACGGTCAT GAACTCCGCG CTCGGCGGGA TCGCCTACAT GGCCGATTTC
GCCATCGGCG GCTCGGTCGT CCTGGCGTAC GGATTCGCGA ATGCCGTCAC CTCTATCCTG
GTCGTTGCCG CCATCATCTT TCTGACAGGC ATTCCGATTG CGTACTACTC CGCGAAGTAC
AACATCGATA TGGACCTTCT CACGCGAGGC GCGGGCTTTG GATACTACGG GTCCACGCTG
ACGTCCCTGG TGTACGCGTC GTTCACGTTT ATCTACTTTT CACTCGAAGG ATCCGTCATG
GCCCAGGCGC TCGAGGAATT TTTCCACATC CCGTTGCCCG TCGGCTACTT GATCTGTTCC
TTGGTCATCA TTCCGCTCGT GATGTTCGGC ATGACTGCCC TCTCGAAGTT GCAGGTCATC
ACGCAGCCCA TCTGGCTGGT GCTGATGCTT GGCCCGTTCG TCGCCATCGC GCTCCGGGAC
CCGTCGGCTT TCAGCCAATG GACACACTTC GGCGGCGCTT CGGCTTCGGG CAGCCATTTC
AGCCCCATCG AGTTCGGACT CGCCGCAGGC GTCACCCTCT CCCTCATCGC GCAAATCGGC
GAACAAGTGG ACTATCTTCG TTTCATGCCA AACCTCACGC CGCAGAACCG CGGCAAGTGG
TGGTTGGCCG TCATGCTGGC AGGGCCCGGA TGGGTGCTCC TGGGCGCCAT CAAGCAGCTC
GGTGGGTCGC TTTTGGCTTC GTGGATTGCG CCGACCATGG GGACGAAGGC CGCGGACGAA
CCCATCAACA TGTACACGCA GGCGTTCCAC GTCGTGATGG GGAACAGCTA CGCAGCCCTT
GCGCTTGCGA CCTTCTTTGT TCTTCTATCG CAGATCAAGA TCAATGTCAC CAACGCGTAC
TCTGGATCGC TGTCGTGGTC GAATTTCTTT TCCCGCATCT TTCACACGCA TCCAGGGCGC
GTGGTGTGGC TGTTTTTGAA CGTCGGGATC GCCCTCGGCC TGATGGAGGC CGGCGTCTTC
GGCTTCTTGA ACACGGTGCT CGGATTCTAC TCGAACCTCG CCGTCGCATG GATCGGCGCG
GTGGTGTCCG ATCTCGTCAT CAACAAAGGG TTGCTCAAGA TTAGCCCCTC GTACATCGAG
TTTAAGCGGG GCCATCTGTA CAATTTCAAC CCCGTCGGAT TTGGCTCGAT GATCCTTGCG
GCGGGCGTAT CCATCGCGGC CTTCTTCGGC GCCTTCGGCC CGGTGCTGCA GGCGTACTCG
CCATTCCTCT CGCTCGTGCT CGCGTTTGTG CTCGCGCCGG TCATCGCCAT CGTCACGCGC
GGCAAGTACT ACATTGCGCG GGAAAACACC TTTGAGAAGT CGGATCGCCA CCATGACGGT
CATCGCCATT CCGAGTTGCC GGCGGAATTC ACCTGCGCCT CCTGCGGGTT TGAATACGAG
AAGATGGATA TGCTCTACTG TCCGTTCCAC AAGGCGCCCA TCTGCTCGCT GTGCTGCAGC
CTGGAGAGCA AATGCCACGA TCTCTGCAAG GCGGGCCACG TGCACTGA
|
|---|
| Protein sequence | MSVLQPERGR PTPKRTFNRW VQNPVLEDYA LRYAPKSFRL WSEWTVMNSA LGGIAYMADF
AIGGSVVLAY GFANAVTSIL VVAAIIFLTG IPIAYYSAKY NIDMDLLTRG AGFGYYGSTL
TSLVYASFTF IYFSLEGSVM AQALEEFFHI PLPVGYLICS LVIIPLVMFG MTALSKLQVI
TQPIWLVLML GPFVAIALRD PSAFSQWTHF GGASASGSHF SPIEFGLAAG VTLSLIAQIG
EQVDYLRFMP NLTPQNRGKW WLAVMLAGPG WVLLGAIKQL GGSLLASWIA PTMGTKAADE
PINMYTQAFH VVMGNSYAAL ALATFFVLLS QIKINVTNAY SGSLSWSNFF SRIFHTHPGR
VVWLFLNVGI ALGLMEAGVF GFLNTVLGFY SNLAVAWIGA VVSDLVINKG LLKISPSYIE
FKRGHLYNFN PVGFGSMILA AGVSIAAFFG AFGPVLQAYS PFLSLVLAFV LAPVIAIVTR
GKYYIARENT FEKSDRHHDG HRHSELPAEF TCASCGFEYE KMDMLYCPFH KAPICSLCCS
LESKCHDLCK AGHVH
|
|---|
| |