| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2289 |
|---|
| Symbol | |
|---|
| ID | 8425817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2351465 |
|---|
| End bp | 2352520 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645028409 |
|---|
| Product | mannonate dehydratase |
|---|
| Protein accession | YP_003185687 |
|---|
| Protein GI | 258512253 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1312] D-mannonate dehydratase |
|---|
| TIGRFAM ID | [TIGR00695] mannonate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTTT CGTTTCGCTG GTACGGACCG GACGATCCCG TCGCGCTTGA GAAGATCCGC
CAGATCCCAG GGTGCGTAGG CATCGTCTCC GCGCTCTACC ACGTGCCGCC GGGCGAAGTC
TGGCCGGAGG ACGAGATCCG CGAGCTCGTG CGGCAGGTGG AGTCGCGCGG CTTTCGCCTG
ACCGTCGTCG AAAGTGTGCC GGTGCACGAG GACATTAAGC TCGGGCGCCC GGCGCGCGAC
AAGTACATCG AGGCGTACCA GGAGACGCTC AGGCGGCTCG CGAAGGCCGG GATCGACACG
GTCTGCTACA ACTTCATGCC GCTCTTTGAC TGGATGCGCA CCTCGCTCGC GTATCCGTTG
CCGGACGGAT CGAACTCGCT CGCCTATTTC CACGACGAGG TGGACGAAGA GGCGCTCCTG
TCGGGACGGG TGAAGCTGCC GGTGTGGAAC ATCGACGAGG ATGGCGAGAA ACTGCGCCGT
CTGCGGGACG AGTACCGGGA GCGGGGCGAC GAGGGACTGT GGGACAGCCT CGCCTACTTC
CTGCGCGCCG TGGCTCCCGT CGCTGAAGAG GTGGGCATTC GCCTGGCCAT CCATCCGGAC
GATCCGCCCT GGCCCGTGAT TGGCATCCCG CGCATCATCG GGCGGCACGC GTCGTTTGTG
CGCATGTTCG AGATCTGCGA CTCGCCCGCA AACGGCGTGT GCTTCTGCTC CGGATCGCTC
GGTGCAACGG CGGAGAACGA CCTGCCCGCC ATCCTGCGCG ATCTCGGCGA GCGAAATCGG
CTGCACTTCG TCCACCTGCG AAACGTGAAG CGCGTCGGGG AAAAGTCGTT CTACGAATCC
GGCCACCTGT CGCGGGACGG ATCGGTCGAC ATGGCGGAGC TCGTGGCCAT CCTCGCGAAG
CTCGATTACC AAGGCCCGGC GAGGCCCGAT CACGGCCGGA TGATCTGGGG CGAGACGGGG
ATCCCGGGCT ACGGCCTGTA CGATCGCGCG CTCGGCCTCA CGTACCTCAA CGGCCTCTGG
GAGGCGTCTC GCGCGTTCGT CACCAACAGG GTCTGA
|
|---|
| Protein sequence | MQLSFRWYGP DDPVALEKIR QIPGCVGIVS ALYHVPPGEV WPEDEIRELV RQVESRGFRL
TVVESVPVHE DIKLGRPARD KYIEAYQETL RRLAKAGIDT VCYNFMPLFD WMRTSLAYPL
PDGSNSLAYF HDEVDEEALL SGRVKLPVWN IDEDGEKLRR LRDEYRERGD EGLWDSLAYF
LRAVAPVAEE VGIRLAIHPD DPPWPVIGIP RIIGRHASFV RMFEICDSPA NGVCFCSGSL
GATAENDLPA ILRDLGERNR LHFVHLRNVK RVGEKSFYES GHLSRDGSVD MAELVAILAK
LDYQGPARPD HGRMIWGETG IPGYGLYDRA LGLTYLNGLW EASRAFVTNR V
|
|---|
| |