Gene Aaci_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2238 
Symbol 
ID8425766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2297392 
End bp2298414 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content60% 
IMG OID645028358 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003185636 
Protein GI258512202 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAGCGA CCATCCGCGA CGTCGCCAAG GCGGCGGGGG TGTCTGCCGC GACCGTGTCT 
CGCGCCCTGA ATCGGCCGGA CCTGGTCGAT CCCGAGACCC TCGAGCGCGT TCGCAAGGCG
ATGGAAGAGA TGTCGTATCA GCCGAGCGCC ATCGCTCGAG GGCTATCCGC GCGAAGAAGC
GACACGCTGG GACTCATCGT GCCCGGCATC ACGGATTTCT TTTTCAACGA GCTCTACAAG
GGCATTGATC GTGCCAGTCA ACAGTACGGC ATGAAGGTCT TGCTGTACGA CTCTGAGCAT
TCGCGCGAGC GGGCGTTTGA GGGCTTCTCC ATCCTCAGCG GCTACCAGGT GTCGGGCATC
ATCTTCACCA GCAAACTGGT GACGGAGGAC TACGACCCCA TTCTTCAGCG AGTCAACATC
CCTGTCGTCC TCACGCTGAC GCAGAGCGCC GCGAAGACGC CGCTCACCGC CTTTCGCATC
GATGAAGTGC GCGCCATGTT CGACGTCGTG GCGTACCTGG TGTCCAGAGG ACATCGGCAG
ATTGCGATGA TCGCTGGCAA GCTATGGGAC GACCGGACCG GCGAATTGCG CTTGGAAGGC
TACCGGGAAG GGCTTCGCCA TTTCGGGATC GAGTATTGCG AGGCGCGCGT GGAGTTTGGG
CAGTATCGTT TTGATGACGG CTATCAGGCC ATGCAGCGCT TGCTGGAGCG GATCCGAGAC
GTGCCCTTCA CAGCGGTGTG CACCGCGTCG GATGAAATGG CGCTCGGCGC GATACGCTGT
TTGAACGATC ACGGCTATCG CGTGCCAGAT GACATCTCTG TCATGGGATT TGACGATCTG
CCCATCGCGC GCATGGTGAC ACCGAGGCTT ACGACGGTCG CTCAGCCGTT TCATGAAATC
GGTGAGGAAG CTGTCAAATG GTTGATTCGG GCGGCGTCTC AGCCTCCGTC ACCTTCCGAG
ATTGGGGATT ACTTGTTGCC GCATCGCCTA GTGGAACGTG AGTCTGTGCG TTCCATTTCC
TGA
 
Protein sequence
MRATIRDVAK AAGVSAATVS RALNRPDLVD PETLERVRKA MEEMSYQPSA IARGLSARRS 
DTLGLIVPGI TDFFFNELYK GIDRASQQYG MKVLLYDSEH SRERAFEGFS ILSGYQVSGI
IFTSKLVTED YDPILQRVNI PVVLTLTQSA AKTPLTAFRI DEVRAMFDVV AYLVSRGHRQ
IAMIAGKLWD DRTGELRLEG YREGLRHFGI EYCEARVEFG QYRFDDGYQA MQRLLERIRD
VPFTAVCTAS DEMALGAIRC LNDHGYRVPD DISVMGFDDL PIARMVTPRL TTVAQPFHEI
GEEAVKWLIR AASQPPSPSE IGDYLLPHRL VERESVRSIS