| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2212 |
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| Symbol | |
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| ID | 8425740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | - |
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| Start bp | 2271995 |
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| End bp | 2272699 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645028332 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003185610 |
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| Protein GI | 258512176 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00605445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTGGC GTCGGCGGCG CGTGTGGCGC GTTCGCTTCT TACCTCCGAC ACCTTATGGC
GATCCCGCCC CTGCCGGTTG GATCTTTTTA CTCGTCACGG TGTTGTGGTA CCTCATCGTG
GAGACCATCA CGGGCAGGTC GACGTTTGGC CTTCTGCGCG CTGGCGCGCT GTATCCGCCG
CTCGTGGAGC ACGGCCAGTG GTTTCGCGTC CTGAGCACGA TGTTTGTCCA CGTGAGCCTC
TGGCACATCC TCGTGAATAT GATCTCGCTG TGGACCTTGT TCGTGGTCGA GCAGGCGCTG
TCGACGCCTG TGTTCATCGC ATTGTACGTC ATCTCGGGCG CGGTCGGCAG TTTGCTGACG
CTGCCCATCT CGCCGGACCA GGTCTCGGCG GGCGCGTCGG GAGCCATCTT CGGCCTGTTC
GGCGCGATGC TTGCGCTCGC CTTGATGGGC ATGTTTCCGC CATATGTCCG CAACCAATTG
CTGATGGTGC TCGCGGTTAA TGTCGTGATC GACATCATGA ACCTGGGGAC CATCGGCTGG
ATGGCGCACT TGGGCGGGCT TGCGACCGGA ATGGCCTTGA CCTACGGATT TGCGAAATGG
CTCCGGAACC CGCGGTTTTG GACGGTGCTC GCCTGGATAT GCAGCTTGGC CTGCGGAATC
AGCTTGGTGT GGGATCTGGC GACGCCGTTG CCACTGTCCT GGTGA
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| Protein sequence | MMWRRRRVWR VRFLPPTPYG DPAPAGWIFL LVTVLWYLIV ETITGRSTFG LLRAGALYPP
LVEHGQWFRV LSTMFVHVSL WHILVNMISL WTLFVVEQAL STPVFIALYV ISGAVGSLLT
LPISPDQVSA GASGAIFGLF GAMLALALMG MFPPYVRNQL LMVLAVNVVI DIMNLGTIGW
MAHLGGLATG MALTYGFAKW LRNPRFWTVL AWICSLACGI SLVWDLATPL PLSW
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