Gene Aaci_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2197 
Symbol 
ID8425721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp2259731 
End bp2259931 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content54% 
IMG OID645028313 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_003185595 
Protein GI258512161 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000106738 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAG GTACAGTCAA GTGGTTCAAC TCGGAGAAGG GCTACGGTTT CATTCAGGTG 
GAGAACGGGG ACGACGTGTT CGTTCATTAC AGCGCCATCC AAGGACACGG CTTCAAGACG 
CTGGACGAAG GGCAACGCGT GACGTTCGAC ATCGTTGAGG GGCCCAAGGG TCCGCAGGCA 
GCGAATGTCG TGAAATATTA A
 
Protein sequence
MYEGTVKWFN SEKGYGFIQV ENGDDVFVHY SAIQGHGFKT LDEGQRVTFD IVEGPKGPQA 
ANVVKY