Gene Aaci_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2194 
Symbol 
ID8425718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2257059 
End bp2257718 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content52% 
IMG OID645028310 
Productprotein of unknown function DUF1003 
Protein accessionYP_003185592 
Protein GI258512158 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0196461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGC GGTATTATTA CGTGTACACG GATCATGACG ACGAAGACAA CGCCAACTTG 
GAAGGGTTTG ATATTCCCAT TAACGAAGGC GACGCCAAGC GGATCGCCCG GCTGGTCAAC 
TTATATGAGG AAAATATCCT GTCCATGTTG GACGAGGAGT ATCAGCGCAA GACGAAGTGG 
TCAGATAAGT TGGCGGATCG CATGGCCGCG TTTGGCGGAA GTTGGACCTT CATCATCATC 
TTTGCGACAC TGCTCGTTTC GTGGATGGTG TGGAACGCGG CGCCGGGTAC GCGGAGATTT 
CACTTCGATC CGCCCCCGTT CATTCTCTTG AATCTGTGCC TGTCGTTCTT GGCCGCTTTT 
CAGGCGCCCA TCATCATGAT GAGTCAGAAC CGGCAGGCTG CTCGTGACAA ACATGAGGCC 
ATCATCGACT TCGCGATTAA CTATAAGGCT GAACAAGAAA TTGATGATAT GCAGAGTCAC 
TTGCACCGAA TTGAAGGCAA GTTGCTGCAA CTGGAGCGCC TGTTAAAGCG CTTGGATGCC 
GTGGTGCTGC AACAGCAGGA GATGAGCTTG AATGCGCCAC GTGCAGCAGT TGCGAGCGAA 
AAAAAGGCCG AAGAAGGAAC TGAGAACGAG GTGAAGAATT CAGAACAGGA AAACACTTGA
 
Protein sequence
MAKRYYYVYT DHDDEDNANL EGFDIPINEG DAKRIARLVN LYEENILSML DEEYQRKTKW 
SDKLADRMAA FGGSWTFIII FATLLVSWMV WNAAPGTRRF HFDPPPFILL NLCLSFLAAF 
QAPIIMMSQN RQAARDKHEA IIDFAINYKA EQEIDDMQSH LHRIEGKLLQ LERLLKRLDA 
VVLQQQEMSL NAPRAAVASE KKAEEGTENE VKNSEQENT