| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2181 |
|---|
| Symbol | |
|---|
| ID | 8425703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2244378 |
|---|
| End bp | 2245790 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645028295 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003185579 |
|---|
| Protein GI | 258512145 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000990983 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACT TTCGTCACGT GAATCTCCTG ACCAGGCTGG ATCGCCTGCC GATCACGCCG
CGCGTGGTGG GGATCATCGC GCTCCTATCG CTCGTGTGGC TGGCGGAGGC GTTCGACATC
GGCATCGTGG GGCCGGTGCT CACCACGCTC GAAAAGGCGT GGCACCTGAC TTCTTGGCAG
ACGGGGCTTT TGGCCATCGC CTCCACCATC GGCATCGTGC TCGGCATGAT GCCCGCGGGC
ATGATGGCGG ATCGATTCGG GAGACGGCGC GTCATCCTGA TGGGCATCGG GTGGTTTTCG
ATGGTCACGA TGCTCGGCGC GCTCGCGCGG AATGTGGCGG CCCTCTTTCT CGTGCGGCTC
GTGGCGGGCA TCGGCGAAGG TGCGGTGTTG CCCATGCCGT ATCTCATCCT GTCCGAATTC
ACGAATTACC GGCGGCGGGC CGTCAGCGTG GGGTACGCCA ACGGGATCCT GACCGCTGCG
TATGTCGTCC CGAGCCTCGT GTCGGTCTGG GCACTTCATC ACTACGCCCA GGACGTGGCG
TGGCGCGTCC CGTTTCTTCT CGGCGGCGTG CCGCTTCTGA TGCTGATCCC GATTGCCCTT
TGGCTCCCGG AGTCGCCGCG ATACCTGCTC GATAAAGGTC GACAAGCCCC GGTGGCCCGC
CTCGTCGAGG CCCTGGAGCA GGAGGCGGCG TTGCCGCACG ACGAATCGCT GTATGACGAG
GTGATCGCGG AGACGCTGGA CGAGACGCCG CACGACATGC TGAGGACGCT TCGATCCATC
TTCCGGCCAC CGCTTTTGGC TCGCAGCGCG ATGGTCATCC TCCATCTCAC GGCTGCCCTC
ATTCTGTTCT ACATCCTGCA GGTGTTCGGG CCGGCGCTCT TGGCGAAACG GGGCCTCGGC
GTGTCCAACT CCATTCTGGA CACGGGCCTG ATGATGCTCA TCGCGGGCTT CGGCTCGGTC
TGTCAAGGGT ACCTGTCAGA TCGGTTTGGG CGGAAACGGG TGCTCGCTCT GTATGCCGCG
CTCGCGACGG TCGGCTGTCT GCTCTTTGCC TGGGTGCACA CCCGCGAGGC GACTCTGGCG
GCTGGGTTTC TCACCGCCTT CTTCGGGCTC GGGATCTTCC CCGTGTCGAA GTTGTCCGTC
GCCGAGCAAT ACCCGACCGA GGTCCGGGGG CGAGGCGTGT ACGTGGCGGA GATGATCGCA
CGTGGGATGA GCGGCATCGT CACCACCTAT TTCATCCCGT TTGTGCTCTC GGTGGGTGGC
GATCGCGTCG TGTTTCTGGG GATTGCGGTT GTGCTGGTCG CCTTCACGGC TCCGTTTGTG
GCGTTTGGGC GAGAGACCGC CCAATTGCAG TTGGAATACG CGACGAGTGT CCTACCGCTC
AAGCGGGTTC GGCCTAGGCT GTCGCGGCAC TGA
|
|---|
| Protein sequence | MADFRHVNLL TRLDRLPITP RVVGIIALLS LVWLAEAFDI GIVGPVLTTL EKAWHLTSWQ
TGLLAIASTI GIVLGMMPAG MMADRFGRRR VILMGIGWFS MVTMLGALAR NVAALFLVRL
VAGIGEGAVL PMPYLILSEF TNYRRRAVSV GYANGILTAA YVVPSLVSVW ALHHYAQDVA
WRVPFLLGGV PLLMLIPIAL WLPESPRYLL DKGRQAPVAR LVEALEQEAA LPHDESLYDE
VIAETLDETP HDMLRTLRSI FRPPLLARSA MVILHLTAAL ILFYILQVFG PALLAKRGLG
VSNSILDTGL MMLIAGFGSV CQGYLSDRFG RKRVLALYAA LATVGCLLFA WVHTREATLA
AGFLTAFFGL GIFPVSKLSV AEQYPTEVRG RGVYVAEMIA RGMSGIVTTY FIPFVLSVGG
DRVVFLGIAV VLVAFTAPFV AFGRETAQLQ LEYATSVLPL KRVRPRLSRH
|
|---|
| |