Gene Aaci_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2169 
Symbol 
ID8425691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2230266 
End bp2231051 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID645028283 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003185567 
Protein GI258512133 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000507695 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACATCG AATCAGCGCA CAACGACCGC GTCCGGGCAT GGGCGCGGCT CAAGACGCGG 
CGAGGCCGTG AACGGTTGGG CTTGTTCCTC GTGGAGGGCG AGCGCCTGGT GGCCGAACTG
TTGAATAGCC CGCTTCGGCT CGAGGCGCTC CTGTGGAACG TCGCATCGGA CGAGCCTCCA
GACGCCCTGT GGCGTCATCC GAAGGCGGAC GGCCGCCGCT ACGAGCTGTC GCCCCAGGCC
TTTGCGGCCG TGGCCGACAC CGAGACGCCC CAGGGCCTGA TGGCGGTGGC GGCCATTCCG
CGGGCTGAGC CACGATACGG CCCTCGCGTC CTCGTCCTCG ATGCCATCCA GGATCCGGGA
AACGCGGGCA CCCTGGTGCG CAGCGCCGAG GCGTTCGGCT TCGGTGAGAT CTTGTTCGGT
ACTGGCACGG CGGATCCGTA TGCGCCAAAG GTCGTCCGAG CCTCCATGGG CGGGCTGTTT
CGCGTCCACG CTATCGCAGG CGATGCAGAG GCTTACCTCA GGGCCTGGCG AGATCGCCAT
CCCGATGGGG TCATCGTGGC GACGGCTGCG GATGCGAGTG AGCGGTGCGA CGAGGCACCG
ATGGCGGGAG AAGTCGCGGT GGTCATCGGC AATGAGGCCC GCGGCGTGAG CGACGCTGTG
CGCCAACTGG CACAGCGGTG CGTGGCCATC CCCATGGCTG GCAAGGCCGA GAGCTTGAAC
GCGGCGATGG CCGGAACCAT CCTTCTGTAC GAAGCCTACC GGCAGGCTTC GAACCGCGCG
ATCTGA
 
Protein sequence
MYIESAHNDR VRAWARLKTR RGRERLGLFL VEGERLVAEL LNSPLRLEAL LWNVASDEPP 
DALWRHPKAD GRRYELSPQA FAAVADTETP QGLMAVAAIP RAEPRYGPRV LVLDAIQDPG
NAGTLVRSAE AFGFGEILFG TGTADPYAPK VVRASMGGLF RVHAIAGDAE AYLRAWRDRH
PDGVIVATAA DASERCDEAP MAGEVAVVIG NEARGVSDAV RQLAQRCVAI PMAGKAESLN
AAMAGTILLY EAYRQASNRA I