Gene Aaci_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2160 
Symbol 
ID8425682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2223550 
End bp2224320 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID645028274 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003185558 
Protein GI258512124 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATCCAG ACGTGCATTC CGACATCCAA CAGATGCTCC TGGCCGAGGG TTTGCTTTCG 
GAACGTGAAC TTTGGCTCGC GGACTGGCTG CGCCCGGAAC GGCTGCTTCG GCTGCGTGAA
GTCCTCATGC GGCGAACGTC GTATATCGCC GTCGCGATGG AAGCGGTGGA TGACGGGCAC
AATCAGGCCG CCATCCTGCG TAGCGCCGAG GCGTTTGGCG TGCAACATGT GGCCGTGATC
GAGGGGAAGC AGCCGTTTCA TCCGTCGAAG GGCGTAACCC AGGGCGCGCA CAAGTGGCTG
ACCCTCCAAC GCATGCCGGA CATCGGCCGC GCGATTGACG CGCTGCATGC GCGCGGATTT
CAGGTGTATG CGACGGATCT TGGCGAGGGC GCACAGCCCA TTGACGCAGT CGATCTCGCC
CGCCCGACCG CCATCCTGTT CGGCAACGAG AAAGACGGCG TGTCGCCGGA GGCACGCGAG
CGGGCCGACG GGCGATTCTA CATCCCGATG GCAGGGTTCG TGCAGAGCTT CAACGTATCG
GTGGCTGCAG CCATCGCGCT GTATGAGCTG ACACGCAGGG CTCGAGAGAC CGTCGGCGAC
CGGTACGCGC TCGGCGCGGA CGAGCGCCAC AAGCTGTATG TGACGTGGTG CCTTCGTTCT
CTTCACGGTG CCACTCGCGA AGAGGCGCGC CGCAGGCTGG AGTCGAGCGG ATTCGCGCTC
GAAGAGGAGC TTTTCGACGA GGACAACACG GGCTTCAGTG AAAGCGAATA G
 
Protein sequence
MHPDVHSDIQ QMLLAEGLLS ERELWLADWL RPERLLRLRE VLMRRTSYIA VAMEAVDDGH 
NQAAILRSAE AFGVQHVAVI EGKQPFHPSK GVTQGAHKWL TLQRMPDIGR AIDALHARGF
QVYATDLGEG AQPIDAVDLA RPTAILFGNE KDGVSPEARE RADGRFYIPM AGFVQSFNVS
VAAAIALYEL TRRARETVGD RYALGADERH KLYVTWCLRS LHGATREEAR RRLESSGFAL
EEELFDEDNT GFSESE