| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2121 |
|---|
| Symbol | |
|---|
| ID | 8425643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2176458 |
|---|
| End bp | 2177237 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645028235 |
|---|
| Product | Peptidoglycan-binding lysin domain protein |
|---|
| Protein accession | YP_003185519 |
|---|
| Protein GI | 258512085 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3858] Predicted glycosyl hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT ACGTGGTCAA ACCAGGGGAG TCGCTGTATC AGATCAGCCG CAAGACGGGC
GTGCGCCTGC CGCTCATTCT CGCCGCGAAT CCGCAAATCA AGAACGCCAA CGACATTGCG
CCAGGCATGA CCATCGTCAT CCCTGAACTC GGCAAAGGGA CCTCATCCAA GCCGAAGCCG
AAAAAAGCGC AGCCGAAGTC GAACAAGGCC GTGACCAAAC CGTATTTCGG CTACGTTTGG
CCGCATACGG TGCAGCCCGG TGAGACCTGG GCCACCATCG CGGATCGCTA CAACGTCACC
GTGGAGGACC TCGAACACCT GAATCCCGCG CTCGCTTCCC GCGAGCTGAC GCCCGGGCTT
GTCGTGTATG TGCCGCTCGG CCGCGAGCCG CAGATGCCTT CCGGCGTGCC CGAATCGGCT
CCGGGCGCCT GGATGCCCGC TCCCGGCGTC GGCGCTGAGC CATCCCAGCT GATGCCCATG
GAAGGCGCGC CCGACGTCTT CCTCGGCGGT CAGGGTCACC AGGGGCACTT GCAGCAGCCG
CCCGAAGTGA TGCCCGATGA AGGCGTCGAG CCGTGGAACC CGCACGAGGC GGAAGCGCCA
GCATTCGAAG GTCAGGGCGC CGCGGGCGAG ATTCCAGGGG ACGAAACGCT GCTTGGTCCC
GAATACGACG GGGGTCCGCA GATGGATCAA CCGTACAGGC GGGCGGAGGC GATGCTGCCG
GAGACCGACG AAGAGGGTTG GTCCAAGCCG TTCGTCGTGC GCGTGGGGAA CGATGGGTGA
|
|---|
| Protein sequence | MKKYVVKPGE SLYQISRKTG VRLPLILAAN PQIKNANDIA PGMTIVIPEL GKGTSSKPKP
KKAQPKSNKA VTKPYFGYVW PHTVQPGETW ATIADRYNVT VEDLEHLNPA LASRELTPGL
VVYVPLGREP QMPSGVPESA PGAWMPAPGV GAEPSQLMPM EGAPDVFLGG QGHQGHLQQP
PEVMPDEGVE PWNPHEAEAP AFEGQGAAGE IPGDETLLGP EYDGGPQMDQ PYRRAEAMLP
ETDEEGWSKP FVVRVGNDG
|
|---|
| |