| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2114 |
|---|
| Symbol | |
|---|
| ID | 8425636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2171244 |
|---|
| End bp | 2171870 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645028228 |
|---|
| Product | Holliday junction DNA helicase RuvA |
|---|
| Protein accession | YP_003185512 |
|---|
| Protein GI | 258512078 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
|---|
| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.948496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCTT TCTTGCGGGG GCGCGTGGCG TTCCTCGGTC CGGGTTATGT CGATCTCGAC
GTGAGAGACG TGGGCTACCG CGTGCACGTG TGCGACCGCA CACAGGCGGC GCTGAACCTC
GGTGACACCG CATTCTTGTA TACACACCAT CATGTGCGCG AGGACGGCTG GGCGCTGTAC
GGCTTCGAGA CAATCGAGGA ACGGGCCCTG TTTGAACGCC TGGTGGCGGT GTCCGGGATT
GGACCCAAGC TGGCGCTTCA GGTCATTGGC GCCGCAGGCG TGGGCGAGAT CGTCGCGGCC
ATCCTGGCGG AGGACGCCGA AAGCTTGAGT CGCCTGCCTG GCATCGGCCG CAAACTCGCG
AGTCGGTTGG TCGTGGAGTT GCGCGAGAAG CTCGACGACT TGGCGCCCGC TGCCTTGCGC
GCCCCCGCTC CCGCGTCTAG CCCGCAGGGC TCGGCGGCGG AGGACGCGGT GTCGGCGCTT
GTCGCGCTCG GGTACCGCCC TCGGGAGGCC GAAGAGGCGG TGTCTGCGGT CGGCAGAGGC
CGCCAGTCCG TCGAAGACAC CATCAAGGCG GCGCTGACGT ATCTGTACGC GCGAGACGCG
CGAACCGAGC CGCTGTCGCA ACCGTAG
|
|---|
| Protein sequence | MIAFLRGRVA FLGPGYVDLD VRDVGYRVHV CDRTQAALNL GDTAFLYTHH HVREDGWALY
GFETIEERAL FERLVAVSGI GPKLALQVIG AAGVGEIVAA ILAEDAESLS RLPGIGRKLA
SRLVVELREK LDDLAPAALR APAPASSPQG SAAEDAVSAL VALGYRPREA EEAVSAVGRG
RQSVEDTIKA ALTYLYARDA RTEPLSQP
|
|---|
| |