| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2106 |
|---|
| Symbol | |
|---|
| ID | 8425628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2163020 |
|---|
| End bp | 2165182 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645028220 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003185504 |
|---|
| Protein GI | 258512070 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG GCATACCGCT CAAGCGACAA ACCGTGTACA GTCTGATCGT CGGAATCTTC
GGGTGTGGAA CGGCGCTCGT GGGACTCCCG GAGCTCCGAT CTGTGAATAT CTGGTTTTTC
ATCGTCATGC TGGCGCTCGC CTGCCTGGTT GAGGCGATGC CGGTGCCGCT CCGGCTCGGA
TCCGCCAGTC TGACCCCGGC GGTCCTGTTC TCCTATGTGG CGCTCGACGG GCGAGAAGAG
GCGATGTTGT GCGCCATTGC GGCCGCCTTT GTGCCTGCGA TGAGGCGCCA CTGGGATCTC
GAGACTGTGT TTTTCAACGC CGGACAATAT GCGCTCTCGA CGTTCGCCAT GTGGTGGGTG
CTCCGTCAGC TCGTCTCCCT TCCTTTGATC CGCATCGACG CGCTCGCTGT GGGCGCTCTG
CTTTTGTCTG CGGCGGTGTT TCTGGTCGTC AATCACGCGT TTGTGCAAAT CATTCAGTGG
CTGCGGGGAA CGCTCCTCTG GTCAGCCGTG TGGGCTGCGC TCGTCACGGA TCTCATCAAC
CTCGCGCTCT GCATTCCGTT CGCGCTGCTC GTCGTCATGC TGGATTCCAC AAGCGCGTGG
CTCGCGCCCA TCATGGTGCT GCCGCTTCTC ATGTTGGCCT ACATGCTCCG TTCTCATCGG
CAGGCCATGG ACTTGCAGGA GATTCACGAG TGCCTCGCGA ACCTTGCGAC CGAGTTTGAC
ATGCGGCAAA TCGCCCTCGA AGCCGCGCAT CTCGCCCGGA GGATGACGTT GGCCGACTGT
GTCGCGGTGT TCGTCATCGA TGGTCGCGGG TGTCTCGTCC CCGCCGCCGT CTACCCGCGT
TCGTACGAGG CCGAGTTCTC CATGGAAGGC TGGCCGGAAT CGGAGGGCGG CGTTATCTGG
AAAACCATCC ATCAGCGCGA TCACGTCATT GTGCCGGATG TGCGCAAAGA CTCGCGCGTG
CGCTTCTTGG GAGAAACGCC GACCTTTTTG AGCATGGCCA TCTTCCCCAT GCATGCGCAT
CAGAAGGCGC ACGGCGCGAT TGTCTGCTAC GCGAAGCGCC CAAAGGCGTT CAACCACATG
CACGAGTACA TGGACGCCTT GGCGAACCAG GTCTCCGTGC TGCTCGAGAA TGCCAAGCTG
TACCAGGAGC TTCAGGACCG GTCGTTCCGC GACGAAGCCA CAGGGCTTTT GAATTACCGG
TATTTCTACG AGGAGCTCTC TCGGCGCGTT CAGGTGTCGC TACGGGAGAA TCGCCCGGTT
TCCGTGCTGA TTGTGGACGT GGACTTCTTC AAGCGATTCA ACGACACGTA CGGGCACCTG
GCAGGAGATG TGGTGCTTCG CGAAGTCGGG CGCATCCTCG AGCGGCACGC TGCGCCAGAC
GGCGTGGCGG CGCGCTACGG CGGAGAAGAG TTCGCCGTGC TCCTGTGGGC CAGCGCACGC
GAGGCGTACG AGATTGCGGA AGCCATCCGC CAGGATGTGT CGAAGCTCGC GGTGGACTTC
GAAGGATATC ATCTCCAAGG TATCACGGTC AGCATCGGCA TGGCGACCTG CCCGGATCAC
AGCGAGTCGG ATCGCGATCT TCTCGTCAAG GCAGACAGCG CCATGTACTG GGGCGCTAAA
CAGCGCGGGC GCAATCGAAC CGCCATGTAT GCCCCTGAAT TCGACACGCA GTTGTTCGTC
GATCCTCTGA CGAGCCTGTA CACTCATCAC TTCGTGAACA TTCGCGTCCG AGACGAGATG
GCGCACGGCA CGACGTGCTG GGGTGTCATT TGTCTCGATC TCGTCAGGTT CAGCGAGGTA
AACGCCGCGT ACGGGTTTGA AGCAGGGGAC GAGGTGCTGC GCCAGGCCGG GGTCGTCATT
CGTCAGGTGT TGCGACACTC CGAGCTGGCT TGCCGATATG GCGGAGACGA GATGCTCATC
ATCATCCCCA ACGTCTCGGA ATTGGAGCTC GCGGGTATTT GCCGTCGAGT CACGCGGGCC
ATTGAGCAAC ACCCCTTTCA CGTTGGAGAG AACACGCTCT CCGTTCGCGT GGCCTGTGGT
ATGGAGGTCT ACGATGTGGT CCAGGATGGC GCGGACCTGT TCAACCGGAT TGAGGAACTG
TTCGCGCGTC TTCACGCCCC TCTGCACGTG AGCGAGCCCG AATCCCCCTC GCACTCCGTC
TAG
|
|---|
| Protein sequence | MAEGIPLKRQ TVYSLIVGIF GCGTALVGLP ELRSVNIWFF IVMLALACLV EAMPVPLRLG
SASLTPAVLF SYVALDGREE AMLCAIAAAF VPAMRRHWDL ETVFFNAGQY ALSTFAMWWV
LRQLVSLPLI RIDALAVGAL LLSAAVFLVV NHAFVQIIQW LRGTLLWSAV WAALVTDLIN
LALCIPFALL VVMLDSTSAW LAPIMVLPLL MLAYMLRSHR QAMDLQEIHE CLANLATEFD
MRQIALEAAH LARRMTLADC VAVFVIDGRG CLVPAAVYPR SYEAEFSMEG WPESEGGVIW
KTIHQRDHVI VPDVRKDSRV RFLGETPTFL SMAIFPMHAH QKAHGAIVCY AKRPKAFNHM
HEYMDALANQ VSVLLENAKL YQELQDRSFR DEATGLLNYR YFYEELSRRV QVSLRENRPV
SVLIVDVDFF KRFNDTYGHL AGDVVLREVG RILERHAAPD GVAARYGGEE FAVLLWASAR
EAYEIAEAIR QDVSKLAVDF EGYHLQGITV SIGMATCPDH SESDRDLLVK ADSAMYWGAK
QRGRNRTAMY APEFDTQLFV DPLTSLYTHH FVNIRVRDEM AHGTTCWGVI CLDLVRFSEV
NAAYGFEAGD EVLRQAGVVI RQVLRHSELA CRYGGDEMLI IIPNVSELEL AGICRRVTRA
IEQHPFHVGE NTLSVRVACG MEVYDVVQDG ADLFNRIEEL FARLHAPLHV SEPESPSHSV
|
|---|
| |