| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2091 |
|---|
| Symbol | |
|---|
| ID | 8425613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 2145327 |
|---|
| End bp | 2146739 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645028206 |
|---|
| Product | protoporphyrinogen oxidase |
|---|
| Protein accession | YP_003185490 |
|---|
| Protein GI | 258512056 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG TAGCGGTGGT GGGCGGTGGC ATCACGGGTC TCGCGGCTTG CCTGCGCCTT
TTGTCCTCCG ATGCAAACGT GCAAATCCTT CTGTACGAGG CGAGCGATAG GCTTGGCGGG
CGCGTGCAGA CGATTCGCGA GCCCGATCTC GGCATCACGG TGGAAGCGGG CCCGGACTCG
ATGCTCGCGC GAAAGCCCGC AGCGATGCGG CTGATTGAGT CGTTGGGAAT GGCGGAAGAC
GTCGTGTCCA CGCGGCCGGA GGCAACCGAG ACCTACATCG TCCGGGACGG CGGGCTCTGT
CCCATGCCGA AAGGGTACCT GGGAATTCCG TTCGATCCGT CCTGCGTTCG CCCACCCCTC
TTGACCGAGG CCGGGTTGGC GCGCGCCCTA GAGGAGGAGC GGCTGCCGCT CGATCTTCCT
GAAGACGACG CCGCCCTCGG CGCCTTTCTC CGTGCGAGGC TCGGCGACGA GTGGGTGAAC
TACGTCGGCG AGCCGCTCAT GGCAGGCATC TACGCGGGCG ACATCGACCA ACTGTCGCTC
ATGGCCACGT GGCCCTTGCT CCTCGACCTC ATCCGCAACC ACGGCAGCCT CGTGGCGGCA
AGCCGGGCGC TCATGGCCCC GTCGAGCAGG CGCCAGCCTG GCTCGAGCCG GAGCGCGTTC
ATCACCGTGC GCGGCGGGCT GTCGTCCGTG ATCGAGCGCA TGGTGGATCG GATCGAACGG
AGCGGCCGGG TCGAGATCCG CATCGGTGCG CGCGTCGGCG CGGTGACAAG GCGCGGCGCG
GCGTACCGGT TCCATATCGA TACGGCCTCA GGTGAGCGCT TTGAGGAGGA CGTGGACGGC
GTGGTGTTCG CCATCCCGCC GCAAGTCGCC CGCGAGATCA TGAGCTCGGT GATCGACCTT
CCCGACGTGG AAACGCACTA CCAATCGACG GCCACCATCG TACTCGTGTA CGCGCGCACC
GCGTTTGGGC CGGATCTCGC GCGGGCGTCG GGCTTCCTCG TGCCGCGGCC CGAGGGAATG
GCCATCACCG CGACGACGTG GATGTCGAGC AAGTGGCCGC ACGTTGCCCC CGAGTCCCTC
GCCGTGATCC GCGCCTACGT CGGCAGACGC CACCAGGACG AGGCGCTCGC GCTGTCCGAC
GACGAACTGG CGCGTCGCGC GGCGGAAGAG GTCGGACGCC TCACGGGCGC GCGCGAACAC
CCTGTATGGC TTCGGGTGAC GCGCTTTTCG GAGGCGATGC CGAACTACGG CCTGGGACAC
CTCGCCCGCG TGGAGCGGGC GGAAGCGGCG CTTCGCGCGT CCTGTCCCGC GATGGCTATC
GCCGGGGCTG GCTACCGCGG CGTCGGTCTG CCCGACTGCG TGGAGCAGGG CGAACGGGCG
GCCGATCAGG TCCTCGCCGC CATCCGCGCA TGA
|
|---|
| Protein sequence | MKRVAVVGGG ITGLAACLRL LSSDANVQIL LYEASDRLGG RVQTIREPDL GITVEAGPDS
MLARKPAAMR LIESLGMAED VVSTRPEATE TYIVRDGGLC PMPKGYLGIP FDPSCVRPPL
LTEAGLARAL EEERLPLDLP EDDAALGAFL RARLGDEWVN YVGEPLMAGI YAGDIDQLSL
MATWPLLLDL IRNHGSLVAA SRALMAPSSR RQPGSSRSAF ITVRGGLSSV IERMVDRIER
SGRVEIRIGA RVGAVTRRGA AYRFHIDTAS GERFEEDVDG VVFAIPPQVA REIMSSVIDL
PDVETHYQST ATIVLVYART AFGPDLARAS GFLVPRPEGM AITATTWMSS KWPHVAPESL
AVIRAYVGRR HQDEALALSD DELARRAAEE VGRLTGAREH PVWLRVTRFS EAMPNYGLGH
LARVERAEAA LRASCPAMAI AGAGYRGVGL PDCVEQGERA ADQVLAAIRA
|
|---|
| |