| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2082 |
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| Symbol | |
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| ID | 8425604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | + |
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| Start bp | 2137124 |
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| End bp | 2138731 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645028197 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003185481 |
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| Protein GI | 258512047 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.185328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGAAT GGTCATGGAT TGAACATCTC ACAGTTCCCA TCCTCATCTT TGAACGTGAT
GGCCTCTTTC GCTGGAACCA AGCGGCTGGT GATGCCTGGC CGTTTCTGCG AGAAGGCTTC
TCGTGGGACG ATTTCCGGTC CTCATTGACG AGCGGATGGA TCGTACACCT CCACCCCTGG
CCGGACGGCG AATCGTTTCT CGTGGAGTGC CACCCAGACC TGACCGGACC GCTCGCCGAA
CGCTTGCGAG AGATGCGAGA AGCGTATGAG GAGCTGGAAC TGATTTTCTC CGAGGCGTTC
GATGAAGTGT TCGTCACGGA CGGAGACGGG ATCACTCTTC GCGTGAACCG AGCTGCCGAA
CGGCTTTACG GGTTGCGCCA GGAGGAACTC ATTGGCCGCT CCGTCTTTGA CCTGGAGAGA
GAAGGGGTGT TTTACCCTTC GGTGACCGGG CTCGCCTTAA AGTTGCGCCG TCAGGTAACC
GTGTTACAGA CGACGTCAGA TGGCAAACAG CTTTGGGCCA CAGCAAATCC TGTGTTTGAC
CAACACGGAA ACATTCGTAT CGTGATTTCG ACCGCGAAGG AAATCTCCGA TGTCATTCGT
CCCGAGGTCA TGCGAGCTGA GACCTCCGTA GGTGGGATGG ATGCCGACGA ACAGCCACCA
AACATGGTGA CGCGCAGCCC CAAGATGCGC CACGTGTTTC ACATCGCCAA ACGGGTTGCC
GGCACGGACA TCTCCTGTCT GTTGCTCGGC GAAACAGGCG TCGGCAAGAG CACACTGGCC
CAATGGATTC ACCGAATGAG CCCGCGCCAT CGCGGCCCGT TCGTAGAAGT CAACTGCGCG
GCCCTGCCGG AGTCCCTGCT CGAGAGTGAG CTGTTTGGCT ACGAAAGCGG TGCGTTCACA
GGGGCCTTAA AATCGGGGAA GCCTGGCAAG GTGGAGCTTG CTCACGAGGG CACCTTGTTT
TTGGACGAGA TTGCGGAAGT GCCACTCCAT CTTCAAAGCA AGTTGTTGGA TTTCGTGGAA
CGGCGAGTGC TGACGCGAAT CGGAGGTACG CGCATGCACA CGGTGGATGC GCGTATCATC
GCGGCGACCA ATCGCGATTT GAAGCAGATG GTGCGAGATG GCTTGTTTCG GGCCGATCTC
TACTATCGTC TGAATGGTGC GGAAATTGAA GTGCCGCCTC TGCGCGAGCG CAAGGAAGAT
ATCCCGGAAT TGGTACAGCA ACTTCTGCGC CGGATCTTTG ACGAATGCCC CACCATGGTC
AAGCGCGTGC ACCCAGAGGT CATTCGGCGC CTGCAGGCGT ACACCTGGCC GGGCAACGTT
CGCGAGCTGG AGCATGTGGT AAGACGCCTT GTGATCCTAA CGGATGGTGA CTACATCCTC
CCGTCTGACC TGCAGGATGA GTGGATCGAT GAGGAAACAT CGGGGGTTAC CCCGTGCACG
TCCCGAGGAC CGCTCGCGCA ACTCGCACAA TTGGAACGCA ATCTATACGC GGACGCGGCA
CGTCATTGTC GATCGACGTA CGAGATCGCC GAGGCGCTTG GCGTGAGTCA AGCGACCGTG
GTACGGAAAC TGAAAAAGTA CGGCTTGTCG ATCAAGCGTC CGCGCTGA
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| Protein sequence | MPEWSWIEHL TVPILIFERD GLFRWNQAAG DAWPFLREGF SWDDFRSSLT SGWIVHLHPW
PDGESFLVEC HPDLTGPLAE RLREMREAYE ELELIFSEAF DEVFVTDGDG ITLRVNRAAE
RLYGLRQEEL IGRSVFDLER EGVFYPSVTG LALKLRRQVT VLQTTSDGKQ LWATANPVFD
QHGNIRIVIS TAKEISDVIR PEVMRAETSV GGMDADEQPP NMVTRSPKMR HVFHIAKRVA
GTDISCLLLG ETGVGKSTLA QWIHRMSPRH RGPFVEVNCA ALPESLLESE LFGYESGAFT
GALKSGKPGK VELAHEGTLF LDEIAEVPLH LQSKLLDFVE RRVLTRIGGT RMHTVDARII
AATNRDLKQM VRDGLFRADL YYRLNGAEIE VPPLRERKED IPELVQQLLR RIFDECPTMV
KRVHPEVIRR LQAYTWPGNV RELEHVVRRL VILTDGDYIL PSDLQDEWID EETSGVTPCT
SRGPLAQLAQ LERNLYADAA RHCRSTYEIA EALGVSQATV VRKLKKYGLS IKRPR
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