| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2060 |
|---|
| Symbol | |
|---|
| ID | 8425582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2110898 |
|---|
| End bp | 2111608 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645028175 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_003185459 |
|---|
| Protein GI | 258512025 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCCA ACAAGGTGTA CGAGTCGGCG GGGGCCGCAA TCGCGGACAT TCCCAACGGC
GCCACGCTGC TCGTCGGCGG CTTCGGGCTG TGCGGCATTC CCATGGCGCT CATCCAGGCC
CTGCGAGATC GGGGCGTGTC CGATCTGGTC TGCGTCAGCA ACAACTGCGG CGTGGACGAC
TGGGGCCTCG GGATCTTGCT TCAGACGCGG CAGATCCGCA AGATGGTCTC CTCGTACGTC
GGGGAGAACA AGACGTTCGA GCGCCAGTTT CTGAACGGCG AACTCGAGGT GGAGTTGGTT
CCCCAAGGGA CGCTGGCCGA GCGCATCCGC GCCGGCGGCG CGGGCATCCC GGCGTTCTAC
ACCGCCACAG GGGTCGGCAC CTCCGTCGCC GAGGGCAAGG AAGTGCGGAC GTTCGACGGA
CGCGAGTACG TCCTCGAACG AGCCATCACT GGGGATTTTG CACTCATCAA GGGTTGGAAG
GCCGACAAGC TCGGCAACGT CATCTATCAC GAGACGGAGC GCAACTTCAA TCCGGTCATG
GCGACGGCCG CCAAGGTCAC CATCGTCGAG GTGGAGGAGC TTGTGGAGCC AGGCGAATTG
GATCCCAACT TCATTCATAC GCCAAGCATT TACGTGCATC GGATTGTCGT GAATCCGAAC
CCCATCAAGC GGATCGAGCG GAGAACCGTC CGCCCGCGTC CGCAGGCTTG A
|
|---|
| Protein sequence | MRSNKVYESA GAAIADIPNG ATLLVGGFGL CGIPMALIQA LRDRGVSDLV CVSNNCGVDD
WGLGILLQTR QIRKMVSSYV GENKTFERQF LNGELEVELV PQGTLAERIR AGGAGIPAFY
TATGVGTSVA EGKEVRTFDG REYVLERAIT GDFALIKGWK ADKLGNVIYH ETERNFNPVM
ATAAKVTIVE VEELVEPGEL DPNFIHTPSI YVHRIVVNPN PIKRIERRTV RPRPQA
|
|---|
| |