Gene Aaci_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2018 
Symbol 
ID8425540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2063761 
End bp2064309 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content66% 
IMG OID645028135 
ProductHAD superfamily (subfamily IIIA) phosphatase, TIGR01668 
Protein accessionYP_003185419 
Protein GI258511985 
COG category[R] General function prediction only 
COG ID[COG2179] Predicted hydrolase of the HAD superfamily 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCTGGC TCTCGCGGCT CATGCCGGAC GAGTACGTGG CGTCCATTTA CGAGATCGAT 
CTCGACGCCC TGTGGCGGCG GGGGATTCGC CTCATCCTGA CGGATCTCGA CAACACGCTG
GTGCCGTGGA ACCACCCCGA CGTGCCGTCC GAGCTCACCG CGTGGTTGCG CGACGTGCAC
GCGCGCGGTT TTCACGTGTG CATCCTCTCG AACAACGGCG AGGATCGCGT CGGATCGTTC
TCCAAGCTGT GTGGCGTTCC GGCGGTCTCG GCGGCGGGAA AGCCGAAGTC GCGCGGGTTT
TTGGAGGCGC TCCGCCGCTT CCAGATGCCG CCGGAGGCCG CTGCGATGGT GGGCGATCAG
CTTTTCACGG ATATCCAGGG TGCGAAGCGT CTGGGGCTGT ATGCCATCCT GGTGCTTCCG
CAAAATCCGG TGGAGTGGTG GGGCACCAAG ATCTCGCGCA TGGCCGAGCG GGTGGTGTTG
CGGCGGTTGG AAGCGCGAGG GCTCAGGCGC CCCGAGCCTG CCGCGGACAG GAGGCGTTTC
GATGACTGA
 
Protein sequence
MAWLSRLMPD EYVASIYEID LDALWRRGIR LILTDLDNTL VPWNHPDVPS ELTAWLRDVH 
ARGFHVCILS NNGEDRVGSF SKLCGVPAVS AAGKPKSRGF LEALRRFQMP PEAAAMVGDQ
LFTDIQGAKR LGLYAILVLP QNPVEWWGTK ISRMAERVVL RRLEARGLRR PEPAADRRRF
DD