Gene Aaci_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2010 
Symbol 
ID8425532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2057776 
End bp2058681 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID645028127 
Productcompetence protein ComEA helix-hairpin-helix repeat protein 
Protein accessionYP_003185411 
Protein GI258511977 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGATG CCGCGGAACC GCGGCGAGAA GCGTTCTGGG GCGAAGACGA CGCGGGATGG 
GGATTGGCTG AAGATGAAGG TCACTTGCCC GTGTGGACGG GCGAATCCAT GGAGACGGAG
GCAATCGGCC GTCACGAGGG TCGCGCGTCG TTCTTCGCTC GGCTGCGTTC CTCGGCGCGC
TATCTGCGCA TGGTTCTGCT CGTTGGGTTG GCCGCTGGCG CGGCATGGTT CGCGTCCCGG
CAGGTGACGA TGAGCAGCTC TGCGTTGCAT TCGGCTCCGT CGACGTCGGA AACCCAGAGC
GCGGTCGTGC AGGGGACGGA CGCTGAAGCC GCGAACACGA CGACGTTGCA GGTGGATGTA
CATGGAGACG TGCGGCATCC TGGCCTCGTC ACGCTGCAGG AGGGCGCGCG AGTCCGCGAC
GCCATACGCG CCGCGGGTGG CTTTCTGCAT GCCGCGGATG CCGCGGACGT GAATCAGGCG
GCGCTGGTCT GGGACGGCGA AGAGATTGAC ATTCCCGCGG CCACAGCGGT GGACGCGGCG
TCCCAGCCGC AGTCGGGCGT GCAGGACGTG GGCCTGGCGC TTGCCGCGGC GAGCCCCTCG
GGGCACGAGG TGAGCACGAC GTCGCGGGAC GGCACGGGAG GTCGCGCGCG CAAACACGCC
CTCACGGCGG GGCAGAAGAT CAACATCAAC ACCGCGGATC TGGAGACGCT CGAGACGCTG
CCTGGCGTCG GTCCCAAGCG CGCAGCGGCT ATTCTCGCCT ATCGCCAAGC GCATGGCCCG
TTTCGTGACC TTGAAAGCCT TCGTCACGTG AAGGGGATCG GCGAGAAAAC CTTGGCCAAG
TGGAAGGATC TCATCACGTT CGGGGCACCT GGCGACGCAT CGAGCGCGGG CCGTCAAGCG
CCGTGA
 
Protein sequence
MKDAAEPRRE AFWGEDDAGW GLAEDEGHLP VWTGESMETE AIGRHEGRAS FFARLRSSAR 
YLRMVLLVGL AAGAAWFASR QVTMSSSALH SAPSTSETQS AVVQGTDAEA ANTTTLQVDV
HGDVRHPGLV TLQEGARVRD AIRAAGGFLH AADAADVNQA ALVWDGEEID IPAATAVDAA
SQPQSGVQDV GLALAAASPS GHEVSTTSRD GTGGRARKHA LTAGQKININ TADLETLETL
PGVGPKRAAA ILAYRQAHGP FRDLESLRHV KGIGEKTLAK WKDLITFGAP GDASSAGRQA
P