Gene Aaci_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2007 
Symbol 
ID8425529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2053891 
End bp2054901 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID645028124 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_003185408 
Protein GI258511974 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0773552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACATCT TTGACGCGGT CGATCACGTG ACGCAGGCAG GCCTAGCCTC GGTATACCTC 
CTGTACGGGA GCGAAATCGG GCTGTTTGAC TGGTTTTGCG ACGAATTGAT CCGAAATCAT
CAGGTTTCCT CCATGCTCCG CTTCGACTAC CAGGAGGACG GCTTTGAGCC GGCCGAGATG
GAGTTGTGCT CCTACTCGCT TCTGGGAGAC AGGCCCCTCG TGTACGTTCG CAACGCGACA
GCGTTCACGC CCGAGGGCCG ATCCGGCCCG GACGCGGATC GCTTGGCAGC CTATCTCGAA
CAGCCGGTTT CAGGTCGAAC GCTCGTGCTT TCGGTTCCAT CCGACAAATT GGACGAGCGG
CGCCGCGTGA CAAAGCTTGC GAAGCGCCAC GCAGTGATTG CGTGCCCTGT GCCCAGTCGC
GATCGCGACG CGATGGTGAG GCTCGAGCGC CTGGCGCGAT CGAAGGCGGT CGTCATCGAC
AAGGACGCGC TGGCGGAATT GTGGCGTCGC ACGCAGTCGC TGACACTCGC CATGAACGAG
TTCGACAAGC TTCGGGCATA CGCAGGCGGG GGCCCGATTA CGCGCGATCA CGTCCTGGAA
CTGGTGCCGA TGCAGGCCGA GGACAGCGTG TTCACGTGGA TCGATTGGGC GGTTCAGGGC
CAGGTCGCCT CCGTCTTCGA GGCATTAGAT GGGCTTGCGC GCCAAGGATA CGACGCGTTC
TCGCTCATCG CCCTCTTGGC GCGTCAGGTT CGGCTGATGG CCTTCGCGAA GGGAGCTGCC
AACTTGGAAC AGCGAGCGAA AGAGCTTGGC GTCCACCCAT ACGCCCTGCG CACGGCCGCT
CGACAGTCCG CGCGCTTTCC GGAGCGTAAG CTTGCGAGAC TCGTGCGCGT GCTCGCGGAT
GCGGAGTGGG ACGTGAAGCG CGGGCGCTTG GCACCCGAGG TGGCGTTGAA TCTCGTGCTC
ATGGAACTCG CACACGCGGC GAGTACGACG CCGCGCAACC GGGCACAGTA G
 
Protein sequence
MDIFDAVDHV TQAGLASVYL LYGSEIGLFD WFCDELIRNH QVSSMLRFDY QEDGFEPAEM 
ELCSYSLLGD RPLVYVRNAT AFTPEGRSGP DADRLAAYLE QPVSGRTLVL SVPSDKLDER
RRVTKLAKRH AVIACPVPSR DRDAMVRLER LARSKAVVID KDALAELWRR TQSLTLAMNE
FDKLRAYAGG GPITRDHVLE LVPMQAEDSV FTWIDWAVQG QVASVFEALD GLARQGYDAF
SLIALLARQV RLMAFAKGAA NLEQRAKELG VHPYALRTAA RQSARFPERK LARLVRVLAD
AEWDVKRGRL APEVALNLVL MELAHAASTT PRNRAQ