Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2007 |
Symbol | |
ID | 8425529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2053891 |
End bp | 2054901 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645028124 |
Product | DNA polymerase III, delta subunit |
Protein accession | YP_003185408 |
Protein GI | 258511974 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0773552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACATCT TTGACGCGGT CGATCACGTG ACGCAGGCAG GCCTAGCCTC GGTATACCTC CTGTACGGGA GCGAAATCGG GCTGTTTGAC TGGTTTTGCG ACGAATTGAT CCGAAATCAT CAGGTTTCCT CCATGCTCCG CTTCGACTAC CAGGAGGACG GCTTTGAGCC GGCCGAGATG GAGTTGTGCT CCTACTCGCT TCTGGGAGAC AGGCCCCTCG TGTACGTTCG CAACGCGACA GCGTTCACGC CCGAGGGCCG ATCCGGCCCG GACGCGGATC GCTTGGCAGC CTATCTCGAA CAGCCGGTTT CAGGTCGAAC GCTCGTGCTT TCGGTTCCAT CCGACAAATT GGACGAGCGG CGCCGCGTGA CAAAGCTTGC GAAGCGCCAC GCAGTGATTG CGTGCCCTGT GCCCAGTCGC GATCGCGACG CGATGGTGAG GCTCGAGCGC CTGGCGCGAT CGAAGGCGGT CGTCATCGAC AAGGACGCGC TGGCGGAATT GTGGCGTCGC ACGCAGTCGC TGACACTCGC CATGAACGAG TTCGACAAGC TTCGGGCATA CGCAGGCGGG GGCCCGATTA CGCGCGATCA CGTCCTGGAA CTGGTGCCGA TGCAGGCCGA GGACAGCGTG TTCACGTGGA TCGATTGGGC GGTTCAGGGC CAGGTCGCCT CCGTCTTCGA GGCATTAGAT GGGCTTGCGC GCCAAGGATA CGACGCGTTC TCGCTCATCG CCCTCTTGGC GCGTCAGGTT CGGCTGATGG CCTTCGCGAA GGGAGCTGCC AACTTGGAAC AGCGAGCGAA AGAGCTTGGC GTCCACCCAT ACGCCCTGCG CACGGCCGCT CGACAGTCCG CGCGCTTTCC GGAGCGTAAG CTTGCGAGAC TCGTGCGCGT GCTCGCGGAT GCGGAGTGGG ACGTGAAGCG CGGGCGCTTG GCACCCGAGG TGGCGTTGAA TCTCGTGCTC ATGGAACTCG CACACGCGGC GAGTACGACG CCGCGCAACC GGGCACAGTA G
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Protein sequence | MDIFDAVDHV TQAGLASVYL LYGSEIGLFD WFCDELIRNH QVSSMLRFDY QEDGFEPAEM ELCSYSLLGD RPLVYVRNAT AFTPEGRSGP DADRLAAYLE QPVSGRTLVL SVPSDKLDER RRVTKLAKRH AVIACPVPSR DRDAMVRLER LARSKAVVID KDALAELWRR TQSLTLAMNE FDKLRAYAGG GPITRDHVLE LVPMQAEDSV FTWIDWAVQG QVASVFEALD GLARQGYDAF SLIALLARQV RLMAFAKGAA NLEQRAKELG VHPYALRTAA RQSARFPERK LARLVRVLAD AEWDVKRGRL APEVALNLVL MELAHAASTT PRNRAQ
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