Gene Aaci_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1998 
Symbol 
ID8425520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2045881 
End bp2046915 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content61% 
IMG OID645028115 
Productheat-inducible transcription repressor HrcA 
Protein accessionYP_003185399 
Protein GI258511965 
COG category[K] Transcription 
COG ID[COG1420] Transcriptional regulator of heat shock gene 
TIGRFAM ID[TIGR00331] heat shock gene repressor HrcA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.503074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACGC CCCGACAGCA ACTGATTTTG TCCGCGATCA TCGAGGACTA CGTCCGGATG 
GCGGAACCCA TCGGTTCGCG GGCACTCGCC AAACATGAGG AGATTCAATA TAGCCCAGCC 
ACCATCCGAA ATGAGATGGC GGATCTGGAG GAAATGGGCT ATTTAACCCA GCCACACGCC 
TCGGCCGGAC GCTTTCCATC CCAGAAGGGC TACCGGTTCT ATGTCGACAA CCTGTTGCGC 
CTGGGACAGA TGGATCGCGA GACGGGCGAG TTTTTGAAAT CCGTGTTCAC CAAGCGCATC 
GACGAGGTGG AGCAGGTCGC CCGCGAGGTG GCGAACGTGC TCTCCATGCT GACGAAGCAG 
ACGGTGATCG TGCTCGGGCC GAAGACGGAC ACCGAAAAGT TGCGCAAAAT CGAACTCATC 
CCGCTCGGCG GCGGCCGCGC CATCGCCATC TTGGTGACCA ACTCCGGGCA CGTGGAGACC 
GTGCACGTGC GATTTTCGTC CGAGATGGAG GCAGACGACG TCGAGACGCT CGTCCGCGTG 
CTGAACGACA AGGTGGTCGG CGTGCCCATC TCCGAGCTTC GGCGCACGCT GTACGCGGAG 
TTGGCTGGCG AATTGCGCCG GACCGTCGAG CGGTTCGAGG ACGCCATCGC CGTCTTGAAT 
GAGGTGTGCC AAGTGCCGGA GCGCGAGGAG GCCGTCTATA TCGGCGGCGC CTCCAACATG 
CTGGCGCAGC CGGAGTTTCA CGACGTCGGC AAGGCGCAAC CCATTCTCAG CCTGCTGGAA 
CAGAACGAGT CCATCTCGAA CTGGTTCCCG AAGGCGGAGG ACGGGATTGA GGTGCGCATC 
GGCGCGGAAA ACGCAGTGGT GGAGTTGAAG GACTGCACGG TCATTGCCAC CACGTACCGT 
TTGGGTGGCG TGCCGGTGGG CCATATTGGA GTGTTGGGCC CCACGCGCAT GGACTACAAT 
CGCGTCATGC AAATTCTCTC GTTCACCTCG CAGGCGCTGA CGGAGTTTTT GACTCGGTTT 
GCGTCGAGCG GGTGA
 
Protein sequence
MLTPRQQLIL SAIIEDYVRM AEPIGSRALA KHEEIQYSPA TIRNEMADLE EMGYLTQPHA 
SAGRFPSQKG YRFYVDNLLR LGQMDRETGE FLKSVFTKRI DEVEQVAREV ANVLSMLTKQ 
TVIVLGPKTD TEKLRKIELI PLGGGRAIAI LVTNSGHVET VHVRFSSEME ADDVETLVRV 
LNDKVVGVPI SELRRTLYAE LAGELRRTVE RFEDAIAVLN EVCQVPEREE AVYIGGASNM 
LAQPEFHDVG KAQPILSLLE QNESISNWFP KAEDGIEVRI GAENAVVELK DCTVIATTYR 
LGGVPVGHIG VLGPTRMDYN RVMQILSFTS QALTEFLTRF ASSG