Gene Aaci_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1997 
Symbol 
ID8425519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2045239 
End bp2045865 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content64% 
IMG OID645028114 
ProductGrpE protein 
Protein accessionYP_003185398 
Protein GI258511964 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.244965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTCG TGGCGGAGGA TGTCGTGAAG GATCCGAACG AAGAAGAGGC GGCGGCGAAG 
TCGGCGGAGG CGGATGCCGA AGGGGACGCC CGGCCTTCGG AGGACGTCGA TCCGGCTGAG 
ATGGCGGAGG AGGATCTCTC GTACGAGGCC GGCGATTCGG CTGAGGAGGA GGGCGCGTCC 
GCCTCGGAGC CTGATCCGCG CGACGCGCAG ATCGAAGAAT TAACGCAGCA ACTCCTGCGG 
ACGCGGGCGG ATTTCGACAA TTTTCGCCGA CGCACCCGCC AGGAGCGCGA GGAACTCGTT 
CAGTTCGCGA CCAAGAAGCT GCTCGCCGAC TTGCTGCCCG TCCTCGACAA CTTTGACCGC 
GCGATCCAGG CCCTCGAGGG CGTGGATGAG CCGCAGATGA AGCAGGGGAT CGAGATGGTG 
CACCGCCAGC TCATCCAAGT GATGCATCAG TATGGCGTGA CCGAGATGGA CGCCGTCGGC 
GCACCGTTCG ATCCGTCGCA ACATGAAGCG GTCATGCAGG AGCAGGTCGA AGGCCAGGAG 
CCTGGGCGCG TGATTGAGGT GCTGCAGAAG GGGTATCTGC TGCACGGCAA GGTGTTGCGC 
CCGGCCATGG TGAAGGTCAG CGTCTGA
 
Protein sequence
MLLVAEDVVK DPNEEEAAAK SAEADAEGDA RPSEDVDPAE MAEEDLSYEA GDSAEEEGAS 
ASEPDPRDAQ IEELTQQLLR TRADFDNFRR RTRQEREELV QFATKKLLAD LLPVLDNFDR 
AIQALEGVDE PQMKQGIEMV HRQLIQVMHQ YGVTEMDAVG APFDPSQHEA VMQEQVEGQE 
PGRVIEVLQK GYLLHGKVLR PAMVKVSV