Gene Aaci_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1993 
Symbol 
ID8425515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2040323 
End bp2041075 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID645028110 
Productprotein of unknown function DUF558 
Protein accessionYP_003185394 
Protein GI258511960 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.049099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCGC GCCTGTTTTT GGACGTCCAC GTGGACGAAG GGGCTCGCGT GTGGGTGGGC 
GGCGAAGACG GGCATCACTT TTCGCGAGTG CTGCGCGCCA GGCCCGGCGA GGTGCTCGTG
GCGTCCGCCG CCAACGGACC GTTCTGGGCC GAGATCGCGG AGGTGCGCCC CGGTGAGATC
TGCGTGCACT TGCGCGAGCG CGCGCCTTCG AATGAACCGA AGCAACGCTT TGTTTTGGTT
CAAGGCCTGG CCAAAGGCGA GAAGATGGAC ACCATCCTGC AGAAGTGCAC GGAAGTCGGC
GCCTGGGGCT TTGTGGTCTT TGAGGCCGAG CGATCGGTGG TCAGGCTCTC GGGCGCAGCG
AAGGTGGAGC AGAAGCTCGC GCGCTGGCGC AAGGTCGTGC GCGAGGCGGC GATGCAGGCG
CAGCGCGACG TGGTGCCGTT TGTGGCGTGG GCGCCGAGCT TTGCAGCGTC GCTCGTCGCG
CTCACGGAGC ACGGGGTTGA TCACGTCCTC GTGCTCGACG AGGAAGAACG CGCCAACGGG
ATCCTTTCGG CCATTCGGGC CAACGAGGCG GGAAGCCGAA CGGCCGTGGT CGTCGGGCCG
GAGGGCGGAC TCGGCCACGG GGAAAGGCGG ATGGCGAAGC AGGACGCGCG CTGTCAGACG
GTCACGCTCG GTCCGCGCAT CCTGCGTACG GAGACCGCGG GAGCGGTGGC GCTCGCGATT
GCGCTCGCCG AATGGGGCGA CATGGGAGGT TGA
 
Protein sequence
MLPRLFLDVH VDEGARVWVG GEDGHHFSRV LRARPGEVLV ASAANGPFWA EIAEVRPGEI 
CVHLRERAPS NEPKQRFVLV QGLAKGEKMD TILQKCTEVG AWGFVVFEAE RSVVRLSGAA
KVEQKLARWR KVVREAAMQA QRDVVPFVAW APSFAASLVA LTEHGVDHVL VLDEEERANG
ILSAIRANEA GSRTAVVVGP EGGLGHGERR MAKQDARCQT VTLGPRILRT ETAGAVALAI
ALAEWGDMGG