Gene Aaci_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1986 
Symbol 
ID8425508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2034289 
End bp2035503 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content67% 
IMG OID645028103 
Productsporulation protein YqfD 
Protein accessionYP_003185387 
Protein GI258511953 
COG category 
COG ID 
TIGRFAM ID[TIGR02876] sporulation protein YqfD 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACT CGCGGCTGGA ATGGTTCTTG AAGGGATCCG CGACGCTCTG GGTGACGGGG 
CCGGGCGCGC GGCAACTCGT TGCGCGACTG CAGCGGCAGG GCGTCGTGGT GCGGGACGTC 
CGTTTCACGG CAGACGGCGT GATGCTGCGC GTGAGCGTGG CCGCGCTTCG CCACCTGATG 
GCGTCTCGGC GGGCTTACGG CGTGCGGTTT CGCGTCGTCG AACGCCACGG CGCGCCATTT 
CTGGGGAGGC GCCTCGTAAG GCGGAAGGCG TTCGCCGTTG GGGCGGTGGC CTTCGTGGCC 
ATTCTCTACG CGCTCTCGTC CATCGTGTGG CGCGTCGAGA TCGTGGGCGC GGAGGGCGAG 
GATCAAGAGG CGGAGTTGAG GCAGGCCGCG GCTGAGGCAG GGCTTCAGGT GGGTCAATGG 
AAATCGCACC TTGCGCCGCC TGTGGAGTTG GCCGAGCGCA TGGTGGCCCG CGCGCCGAAC 
TACGTGTGGG TGGGCGTGGA AGTCAAGGGT TCGGTCGCGG TGGTGCGGGG GATTCCGAAG 
ATTCCGGGCG TACCTCAGGC GAGCCAACAA CCGTGTAACA TCGTCGCCAC GCGTCCGGGC 
GTGATCCTCG ATGTGCAGGC GTCCCGCGGC CGCGTGATGG TCAAGCCTCA TCAACTGGTG 
CAGCCGGGGC AGGTGCTCAT CTCCGGCCTT CTGACGGATG GGGGACCCAG CGTGCCGGCG 
AGCGGGCACG TGTTCGCGGA GGTGTGGTAC ACCTCCGACG TGTCGATCCC GCTCCGCGTC 
TCGAGCCAAG GGTTGACCGG CGCCTCGGTC TCGCGGGACT ATCTCGCCGT GGGTGGCACG 
CGCCTGCGCG TGTGGGGGTT TCAGGAGGCC CCGCCGGTGG TCTACGAGCG CGACCGCGAG 
ACCGACTGGC ACGTCGGAAG ATGGAGATTG CCCGTGCAGT GGGTGCACGC CACGCTGTAC 
GAGGTCAAGC CCGCCGTTTG GCAGGTGGAC GTCGCCGCGG CCAGGAACGA AGCGCTCATC 
ATGGCGGCCT CAGACGTCCG ATCCATCGCC GGCGGAGAGA TGGTCATTTT GGGCCAGTCA 
ATTTTACAGG AGCGTCTCGA GCGTGGTACT CTATACGCGA CCATACTTAC GCGCGTCCAA 
CAGGACATCG GCGCTCCCGC CGCCATCCCG GAGACGGGGG GGCCGCTCAA GTCTCAAGGC 
GCGGCGCAAT CGTAA
 
Protein sequence
MSDSRLEWFL KGSATLWVTG PGARQLVARL QRQGVVVRDV RFTADGVMLR VSVAALRHLM 
ASRRAYGVRF RVVERHGAPF LGRRLVRRKA FAVGAVAFVA ILYALSSIVW RVEIVGAEGE 
DQEAELRQAA AEAGLQVGQW KSHLAPPVEL AERMVARAPN YVWVGVEVKG SVAVVRGIPK 
IPGVPQASQQ PCNIVATRPG VILDVQASRG RVMVKPHQLV QPGQVLISGL LTDGGPSVPA 
SGHVFAEVWY TSDVSIPLRV SSQGLTGASV SRDYLAVGGT RLRVWGFQEA PPVVYERDRE 
TDWHVGRWRL PVQWVHATLY EVKPAVWQVD VAAARNEALI MAASDVRSIA GGEMVILGQS 
ILQERLERGT LYATILTRVQ QDIGAPAAIP ETGGPLKSQG AAQS