Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1978 |
Symbol | |
ID | 8425500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2026074 |
End bp | 2027879 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645028095 |
Product | DNA primase |
Protein accession | YP_003185379 |
Protein GI | 258511945 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTTC CAGAGACGTT CATAGACACG CTGCGCCAGA AGGTCGACAT CGTCGAAGTC ATCAGTGAAT ACGTGCCCCT GCGCAAATCA GGGCGCTCGT ATGTCGGGCT TTGCCCATTC CACAATGAGC GCACGCCCTC GTTCTCCGTA TCACCCGAAC GCCAAGTGTA TCATTGTTTC GGATGCGGGG CTGGTGGCAC CGTATTCCGG TTTCTCATGG ACATCGAGGG CATCTCGTTT GCAGAGACGG TGACGCTGCT CGCCGAGCGC TGCGGAATCC CTCTGCCCGA TTCGCTCCAC GCGCCCGCTC CGCGCTCGCC GAGGCTCGAG CGGTATCGGC AGGCGCACGA TCTGGCTGCA AAAGCGTTCA ACCACATTCT AATGAATACA GATGCTGGAG TGCAAGCCCT TCACTATCTT CTTTCGCGCG GAATTTCACG CACGACCATG GCGACCTTCC AATTGGGCTA CGCGCCCCCG TCCGGCCGGG CCATGATGTC GTTTCTTCAA CAGAAGGGCT TTTCGGCCGA GGAGCTCATC GCCTGTGGGC TTGCGGTCGA TCTCGGCGGC GAATTGGTGG ATCGGTTCCG CGGCCGCGTG ATCATTCCCA TCGCGGATCG GCGAGGACAG GTCGTCGCCT TCGGCGCGCG GGCGCTCGAT GACGATGCCA AGCCCAAGTA CCTGAATTCG CCTGAGTATG AACTGTTTCA CAAGGGCAGG ATGCTCTTCA ATGTTCATCG CGCTCGAAAA GCGATTCGCC GGGAGCGGAG GGCGCTGTTG CTCGAAGGCT ACATGGATGT CCTGGCGGTT GCGCAGGCGG GCATCGAGTG CGCGGTTGCG ACGCTCGGCA CCAGTCTGAC GGAAGAACAG GCCCAGTTGT TAAAGGCCGA CTGCGACAAG GTCGTGATCG CGTACGACGG CGATGAGGCC GGGCGCAAGG CGACGGTCCG CGCCATCGAG GTCCTCGAGC AGGCGGGCGT CACGCCTGTG GTGCTGCGGC TGCCGGACGG CATGGATCCG GACGAATACA TCCGGGCGCA CGGCGCGCGG GCGTTCGAAC GCATGCTGTC CGAATCGACG TGGACCGCGG TTCAGTTCTT GATCGAGGAC ATGCGCGCTC GAGCGGAATG GGTGAGCCCC GCCGGCCGAA CCGAGTTCTT GCGCCAGGTG CTGCGGTTGC TCGCGGAGCG AGCGAGCCCG GTGGAGCAGG AATATCAGTT GCGAAATTTG TCACAGGAAT TTAACCTCTC TGTCGAAACG TTGAAGGAGG AGATGCGCGG TTTCGCGAAA CCATTAAGGC GTCGTTCTCC TCCGAGAGAA GAGGTCACGC CGTGGGTGAA CTCGCCGCGC GCCGCCAAGG GAAAGGATCA GGTGAGCCTT CGCATCCTCC AAGCTGCGTT GTTCAGCCAG GAGGCGGCAG AGTACCTGAT GGAAAAGGGT GTCACCGAGC TCGCCCATCC GCTGCACACG GCGCTTTTGT CGCACGTGTA TTCCTGGCGG CTCGAGCAGC CGGGACAACC GCCATCGGCG TTCATCGATC GCCTCGAGGA TGAGGAGTTG GTTCGCCTGG CTTCTTCGCT CCTGTTTGAT GAACCTCCCG AGATCACGGT GGAGCTCGTG GAGGATTACC TGAGGGCGCT CGAGCTCTTC AGGTTGGAAC AGGAGCTGAA GGAAAAGGTG CGCGCGTGGA ACGAGGCCGA GGCGGCTGGC GACCAAGAGA AGAGTAGAGA GATCAAGCTG CAAGTGGAGT GGATTCAGAG CCAGATGGCA ACCATGAAGC AGCCCCGCGC GCTCCACGCC GAATGA
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Protein sequence | MNVPETFIDT LRQKVDIVEV ISEYVPLRKS GRSYVGLCPF HNERTPSFSV SPERQVYHCF GCGAGGTVFR FLMDIEGISF AETVTLLAER CGIPLPDSLH APAPRSPRLE RYRQAHDLAA KAFNHILMNT DAGVQALHYL LSRGISRTTM ATFQLGYAPP SGRAMMSFLQ QKGFSAEELI ACGLAVDLGG ELVDRFRGRV IIPIADRRGQ VVAFGARALD DDAKPKYLNS PEYELFHKGR MLFNVHRARK AIRRERRALL LEGYMDVLAV AQAGIECAVA TLGTSLTEEQ AQLLKADCDK VVIAYDGDEA GRKATVRAIE VLEQAGVTPV VLRLPDGMDP DEYIRAHGAR AFERMLSEST WTAVQFLIED MRARAEWVSP AGRTEFLRQV LRLLAERASP VEQEYQLRNL SQEFNLSVET LKEEMRGFAK PLRRRSPPRE EVTPWVNSPR AAKGKDQVSL RILQAALFSQ EAAEYLMEKG VTELAHPLHT ALLSHVYSWR LEQPGQPPSA FIDRLEDEEL VRLASSLLFD EPPEITVELV EDYLRALELF RLEQELKEKV RAWNEAEAAG DQEKSREIKL QVEWIQSQMA TMKQPRALHA E
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