Gene Aaci_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1978 
Symbol 
ID8425500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2026074 
End bp2027879 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content61% 
IMG OID645028095 
ProductDNA primase 
Protein accessionYP_003185379 
Protein GI258511945 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTC CAGAGACGTT CATAGACACG CTGCGCCAGA AGGTCGACAT CGTCGAAGTC 
ATCAGTGAAT ACGTGCCCCT GCGCAAATCA GGGCGCTCGT ATGTCGGGCT TTGCCCATTC
CACAATGAGC GCACGCCCTC GTTCTCCGTA TCACCCGAAC GCCAAGTGTA TCATTGTTTC
GGATGCGGGG CTGGTGGCAC CGTATTCCGG TTTCTCATGG ACATCGAGGG CATCTCGTTT
GCAGAGACGG TGACGCTGCT CGCCGAGCGC TGCGGAATCC CTCTGCCCGA TTCGCTCCAC
GCGCCCGCTC CGCGCTCGCC GAGGCTCGAG CGGTATCGGC AGGCGCACGA TCTGGCTGCA
AAAGCGTTCA ACCACATTCT AATGAATACA GATGCTGGAG TGCAAGCCCT TCACTATCTT
CTTTCGCGCG GAATTTCACG CACGACCATG GCGACCTTCC AATTGGGCTA CGCGCCCCCG
TCCGGCCGGG CCATGATGTC GTTTCTTCAA CAGAAGGGCT TTTCGGCCGA GGAGCTCATC
GCCTGTGGGC TTGCGGTCGA TCTCGGCGGC GAATTGGTGG ATCGGTTCCG CGGCCGCGTG
ATCATTCCCA TCGCGGATCG GCGAGGACAG GTCGTCGCCT TCGGCGCGCG GGCGCTCGAT
GACGATGCCA AGCCCAAGTA CCTGAATTCG CCTGAGTATG AACTGTTTCA CAAGGGCAGG
ATGCTCTTCA ATGTTCATCG CGCTCGAAAA GCGATTCGCC GGGAGCGGAG GGCGCTGTTG
CTCGAAGGCT ACATGGATGT CCTGGCGGTT GCGCAGGCGG GCATCGAGTG CGCGGTTGCG
ACGCTCGGCA CCAGTCTGAC GGAAGAACAG GCCCAGTTGT TAAAGGCCGA CTGCGACAAG
GTCGTGATCG CGTACGACGG CGATGAGGCC GGGCGCAAGG CGACGGTCCG CGCCATCGAG
GTCCTCGAGC AGGCGGGCGT CACGCCTGTG GTGCTGCGGC TGCCGGACGG CATGGATCCG
GACGAATACA TCCGGGCGCA CGGCGCGCGG GCGTTCGAAC GCATGCTGTC CGAATCGACG
TGGACCGCGG TTCAGTTCTT GATCGAGGAC ATGCGCGCTC GAGCGGAATG GGTGAGCCCC
GCCGGCCGAA CCGAGTTCTT GCGCCAGGTG CTGCGGTTGC TCGCGGAGCG AGCGAGCCCG
GTGGAGCAGG AATATCAGTT GCGAAATTTG TCACAGGAAT TTAACCTCTC TGTCGAAACG
TTGAAGGAGG AGATGCGCGG TTTCGCGAAA CCATTAAGGC GTCGTTCTCC TCCGAGAGAA
GAGGTCACGC CGTGGGTGAA CTCGCCGCGC GCCGCCAAGG GAAAGGATCA GGTGAGCCTT
CGCATCCTCC AAGCTGCGTT GTTCAGCCAG GAGGCGGCAG AGTACCTGAT GGAAAAGGGT
GTCACCGAGC TCGCCCATCC GCTGCACACG GCGCTTTTGT CGCACGTGTA TTCCTGGCGG
CTCGAGCAGC CGGGACAACC GCCATCGGCG TTCATCGATC GCCTCGAGGA TGAGGAGTTG
GTTCGCCTGG CTTCTTCGCT CCTGTTTGAT GAACCTCCCG AGATCACGGT GGAGCTCGTG
GAGGATTACC TGAGGGCGCT CGAGCTCTTC AGGTTGGAAC AGGAGCTGAA GGAAAAGGTG
CGCGCGTGGA ACGAGGCCGA GGCGGCTGGC GACCAAGAGA AGAGTAGAGA GATCAAGCTG
CAAGTGGAGT GGATTCAGAG CCAGATGGCA ACCATGAAGC AGCCCCGCGC GCTCCACGCC
GAATGA
 
Protein sequence
MNVPETFIDT LRQKVDIVEV ISEYVPLRKS GRSYVGLCPF HNERTPSFSV SPERQVYHCF 
GCGAGGTVFR FLMDIEGISF AETVTLLAER CGIPLPDSLH APAPRSPRLE RYRQAHDLAA
KAFNHILMNT DAGVQALHYL LSRGISRTTM ATFQLGYAPP SGRAMMSFLQ QKGFSAEELI
ACGLAVDLGG ELVDRFRGRV IIPIADRRGQ VVAFGARALD DDAKPKYLNS PEYELFHKGR
MLFNVHRARK AIRRERRALL LEGYMDVLAV AQAGIECAVA TLGTSLTEEQ AQLLKADCDK
VVIAYDGDEA GRKATVRAIE VLEQAGVTPV VLRLPDGMDP DEYIRAHGAR AFERMLSEST
WTAVQFLIED MRARAEWVSP AGRTEFLRQV LRLLAERASP VEQEYQLRNL SQEFNLSVET
LKEEMRGFAK PLRRRSPPRE EVTPWVNSPR AAKGKDQVSL RILQAALFSQ EAAEYLMEKG
VTELAHPLHT ALLSHVYSWR LEQPGQPPSA FIDRLEDEEL VRLASSLLFD EPPEITVELV
EDYLRALELF RLEQELKEKV RAWNEAEAAG DQEKSREIKL QVEWIQSQMA TMKQPRALHA
E