| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1974 |
|---|
| Symbol | |
|---|
| ID | 8425496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2022251 |
|---|
| End bp | 2023360 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645028091 |
|---|
| Product | protein of unknown function DUF34 |
|---|
| Protein accession | YP_003185375 |
|---|
| Protein GI | 258511941 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3323] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.13936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTGA CGGTTGCCGA CGTCATGCGG GCCATGGATG TCATCGCGCC GCCGCACATG
GCGATGGAGG GGGACCGCAT TGGGCTTCAA CTGGGCGATC CCGGCCGGCC CGTCGAGAAG
CTCGTGGTGA CGCTCGAGGT GACGCCATCG GTGGCGGATC GCGCCGTCGC ATGGGGGGCG
GATATGATCG TCGCGCACCA TGCGCTTCTC TTTCGCCCGC TGTCCGAAAT TCGCTGGGAC
AAGCCGCGCC AGGCCATGGT CGCGAAGCTC GTCGCGCGCC AAATCGCGTT CTTTGCGGCA
CACACCAATC TCGACTGCGC CCCCGGTGGC GTGAACGACG TGATCGCCGA GAGGCTGGGC
CTCCTCCATC CGGAACTGCT CGAGGTCACG GGGCGCGATA AGCTGGTCAA ACTGGTCGTG
TTCGTGCCGA TGTCGCATGT GGACACGGTT CGCCAGGCGC TCGGCGACGC AGGGGCGGGC
CACATCGGCG GGTATTCCCA CTGCACCTTC GGCTCGCCGG GGACGGGATC GTTCAAGCCG
GGGCCCGGCA CCAACCCGTA CATCGGGGAG GAGGGCAAGC TCGAGCTCGT GGATGAGGTG
CGGCTCGAGA CCATCGCCTA TGAAGGCGAT CTCGGCCGCA TCGTGGCGAA CATGCTGGCG
GTGCACCCGT ACGAGGAGGT GGCGTACGAC GTGTATCCGC TCGCGGTCCC GGGCCGCCCG
TTCGGAATCG GGCGCGTGGG GACGCTAGCC GAACCGATGG AGCTCGAGGC CTTTGTGGAT
CAGGTGAGGC GCGCCTTTCA CCTGCCTCAC CTTCGGTACG CTGGCCATCC GCGGGCGCGC
GTGCAGAAGG TCGCCGTGCT CGGGGGTTCT GGAAGTGGAT GGATTCCACA CGCCTTGGCG
CACGGCGCCG ATGTCCTCGT CACCGCGGAC GTGTCGCACC ATCAGGCGGC GGACGCCGTG
CACGACGGGC TCGCCATTGT CGACGTGCCG CACGCGGCGC TCGAGGCGCC GGTTTGCGAA
GGAGTGGCCC GGAGGCTGCG CGATGCGCTG GGTTCGGCGG TGCAGGTCCG CGTCGACGTC
GAAGGCATCG ATCCGTGGCG CTTCGTGTGA
|
|---|
| Protein sequence | MKVTVADVMR AMDVIAPPHM AMEGDRIGLQ LGDPGRPVEK LVVTLEVTPS VADRAVAWGA
DMIVAHHALL FRPLSEIRWD KPRQAMVAKL VARQIAFFAA HTNLDCAPGG VNDVIAERLG
LLHPELLEVT GRDKLVKLVV FVPMSHVDTV RQALGDAGAG HIGGYSHCTF GSPGTGSFKP
GPGTNPYIGE EGKLELVDEV RLETIAYEGD LGRIVANMLA VHPYEEVAYD VYPLAVPGRP
FGIGRVGTLA EPMELEAFVD QVRRAFHLPH LRYAGHPRAR VQKVAVLGGS GSGWIPHALA
HGADVLVTAD VSHHQAADAV HDGLAIVDVP HAALEAPVCE GVARRLRDAL GSAVQVRVDV
EGIDPWRFV
|
|---|
| |