Gene Aaci_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1962 
Symbol 
ID8425483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2009650 
End bp2011227 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content63% 
IMG OID645028078 
ProductGerA spore germination protein 
Protein accessionYP_003185363 
Protein GI258511929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.346602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACCT ACACTGGCAA GCTGGATGAC GCACTGAAAT ACTTCCGAAG CACGGTCGGA 
CAGAGCGACG ACTTCGTCGT GCGGATCTTC GAAATTGGCA AGGTGTCGGG CGCGCTCCTC
TTTTACACCA GCATCTGCGA CAAGCGCGCG GTCGAGGACA CGCTGCGGGC CATTCACCGC
CACCGCTTCC CGCGCCGCAC GCCGCGCCCA CTGCCGCAGT ACCTCGTGGA GCGCGTGCTG
ACGGGATCGG AGACCATGTT CATGGCGAGC ACCTTCGAGC TGAAGGAGGC CATTTCGGCG
GGGAAGCTGG TGATGCTGCT CGACGGCCAC CCTCCCGCCA TCGTCATCAG CGCGAAGGCG
GTGGAACACC GCGCGCCCGA CCAGCCCATC CTGGAGACGT CGACCCGCGG ATCGCAGGTC
GCCTTCGTGG AGAACATCGA CATCAATCTC GGCATGATCC GCCAGTACAT GTCCACGGAC
ACGCTGGTCA TCAAGCGCTG GTCCATTGGC GTGCGCTCGC ACCGCGTCGT GGCCATGGTG
TACGTGCGCG ACATCGCGAA TCCCATTCTC GTGGAGACCG TGTCCAAGCG GCTCGAGGCC
ATCCACACCG ACATCATCAA CGGCTCCGCG GCGGTGGAGC AGCGCATCGT GGATCACCCG
TGGTCCTTGT TCAGCCTCGT GCGCATGACC TCCCGCGTGG ATGGGACGTG CATGGAACTC
AACCAGGGCA AGGTGGCCAT TGTCGTGGAC GGCGATCCGA CCGTGCTTCT GGCGCCGGCG
ACGTTCCAGG ACTTCTTCCA GACCGTCGAG GACTACATGC ACACCTGGTG GGAAGCGACG
TTCATGCGGG TCCTCCGCGT GATCGCGTTC ATCCTCGCCG TCTGGCTTCC GGCGCTGTAC
ATCGCGTTTG TCGACTACAG CCCGGACCTT CTGCCGAAGA CGATGGCGCT GCAAATCGCC
CAGTCGCGGC AGGGCGTGCC GTTCCCAGCC GTGATGGAGG TCATCATCAT GCAACTCGTT
GTCGAGATCC TGCGCGAGGC CACGCTGCGC ATGCCGAGGC AAATGGGGCA GGCCATTAGC
ATCGTCGGCG GTCTGGTCGT GGGCGAAGCC ATCGTCCAGG CCGGCATCGT CTCCAATGTG
CTCCTCATCG TGGTGGCGCT GTCCGCGGTC TCCGTGTTCG TGACGCCGAG CTATGAGTTC
ACCGTGATGT CGCGCCTCGG CGGATGGGTT ATGATTGTCG CGGCCACGCT GCTCGGGTTC
TACGGCGTCG TTCTTGCCAC CATCTGGACC TTGTTTGAGA TCTGCAATCT CTATTCGTTT
GGCATCCCGT ATGTCGATCC ACTGGGAGGC GATCACGTCA AGGACGTGTT CCTCGACGGA
CTTGTGCGGC TTCCCATCAC GGTACTGGAC AGGCGCCCCG AACACCTGCA TCCCGTGGAT
ACCACGGGCG AGACGGATCT GATGGTGCCC ATGCCCAACC CGCAGCTCGA GAAGTGGGAA
CCTGGTGGCA AGAGGCCACA ACATGACGCG CGCCGCCAGA AAGCGAACTG GCGCAAGAGG
AAGCGGTTGG ACCTATGA
 
Protein sequence
MPTYTGKLDD ALKYFRSTVG QSDDFVVRIF EIGKVSGALL FYTSICDKRA VEDTLRAIHR 
HRFPRRTPRP LPQYLVERVL TGSETMFMAS TFELKEAISA GKLVMLLDGH PPAIVISAKA
VEHRAPDQPI LETSTRGSQV AFVENIDINL GMIRQYMSTD TLVIKRWSIG VRSHRVVAMV
YVRDIANPIL VETVSKRLEA IHTDIINGSA AVEQRIVDHP WSLFSLVRMT SRVDGTCMEL
NQGKVAIVVD GDPTVLLAPA TFQDFFQTVE DYMHTWWEAT FMRVLRVIAF ILAVWLPALY
IAFVDYSPDL LPKTMALQIA QSRQGVPFPA VMEVIIMQLV VEILREATLR MPRQMGQAIS
IVGGLVVGEA IVQAGIVSNV LLIVVALSAV SVFVTPSYEF TVMSRLGGWV MIVAATLLGF
YGVVLATIWT LFEICNLYSF GIPYVDPLGG DHVKDVFLDG LVRLPITVLD RRPEHLHPVD
TTGETDLMVP MPNPQLEKWE PGGKRPQHDA RRQKANWRKR KRLDL