Gene Aaci_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1960 
Symbol 
ID8425481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2008169 
End bp2009146 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID645028076 
Producthypothetical protein 
Protein accessionYP_003185361 
Protein GI258511927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGAA GGCAGGCCAT CCTTCCGGTC GCCAGGCGCG CTCACGCGTG GCGTCGGCGG 
CTCGGATGGG TCGCTTCGGG CGCGCTTTTG GCCGTGGGCG GATGGTGCGT GGGGTGGCTG 
CAGAGCCGGG ACACGAGCGT GCTCGCGGCC GACGGCACGG CCGCCTTGTC GGCTCGGTTG 
ACGACGGAGA AGGTGATGGT CGTCGGCGGA TCCATGGCGC ACGGGTGGAA GGATCCTCAC 
GACGACAGCT ACCTCCGCCG CGCCTTCGCC GCGCTGTCGG CCTCGACGGA CACCACGTAC 
ACGTACGACG ATCGGACGGT GGTCGGCGGA TCGCCGGTGA CGCTTGACCG AGACGGCAAG 
TACCAGGCAT GGCTGGAGGA AGATCGGCCT CAGGTGGTCG TCCTCTCGTG GGGGCTTCTC 
AACGATATCT ACGACAAGAC GCCGTTGGAG GCGTTTCGGC AAGCCATCGC GGACGAAATC 
GAGGAAGCGC TCGCGCAGCA CGCGGTGGTG CTCGTGGTCA CTTCACCGGT CACCAAAGCC 
ACCGCGACGT ACAATCACGC CGAGGACGAG GCGTACATGC AGGTGGAGAG CGACGTCGTC 
GCCTCGTTTG ACAACCCGGA CGTCTACTAT CTCGACTTGA ACCGCGACAT GACGCTGTAT 
ATGGAAGCTC ATCATCAAAC GTGGACAATG TACTATGGGG ACGCCTGGCA TCCGAATGAG 
GCCGGGCACG TTCTCGCGGG GCGACTGTTG TTCGACGAAC TCGTGTCCAC GTTCGGCATG 
GGCCCCATCG CGTGGCAGCC GACGGGATCG CCCAACCCCG GGAACGCCAC GGGGAACGCC 
ACGGGGAACG CCACGGGGAA CGCCACGGGG AACGCCACGG GGAACGCCAC GGGGAACGCC 
ACGGGGAACG CCACGGGGAA CGCCACGGGG AACGCCACGG GGGCGGGCGG CGCAAACGCT 
TCCCGGCCAG TCGCTTGA
 
Protein sequence
MRRRQAILPV ARRAHAWRRR LGWVASGALL AVGGWCVGWL QSRDTSVLAA DGTAALSARL 
TTEKVMVVGG SMAHGWKDPH DDSYLRRAFA ALSASTDTTY TYDDRTVVGG SPVTLDRDGK 
YQAWLEEDRP QVVVLSWGLL NDIYDKTPLE AFRQAIADEI EEALAQHAVV LVVTSPVTKA 
TATYNHAEDE AYMQVESDVV ASFDNPDVYY LDLNRDMTLY MEAHHQTWTM YYGDAWHPNE 
AGHVLAGRLL FDELVSTFGM GPIAWQPTGS PNPGNATGNA TGNATGNATG NATGNATGNA 
TGNATGNATG NATGAGGANA SRPVA