Gene Aaci_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1956 
Symbol 
ID8425477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2004941 
End bp2005876 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content61% 
IMG OID645028072 
Producthomoserine O-succinyltransferase 
Protein accessionYP_003185357 
Protein GI258511923 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATCA AGGTGCCGGA CGATCTGCCC GCGAAAGAAA TTCTCGCCGC CGAGCAGATC 
TTTGTCATGG GCTATCAGCG GGCGTTCACG CAGGACATCC GTCCTCTCAA AATCTTGATC
CTCAACCTCA TGCCGAAAAA AGAGGTCACC GAGACGCAGC TTCTTCGCCT GCTTGGAAAC
TCGCCTCTGC AGGTGGAGGT CACGCTCCTG CGCATGCGCT CCCACGTGGC GAAAAATACG
CCGGCTGAGC ACCTGGAGAT GTTTTATCAG ACGTTTGATG AGGTGTCCGA GCAGGCGTTT
GACGGCATGA TCATCACGGG CGCTCCCGTT GAGCACCTTC CCTTTGAAGA AGTGACGTAC
TGGGACGAGT TGTGCGAGAT CCTGGACTGG ACGCGATCGG CGGTGACGTC CACCTTGCAC
ATCTGTTGGG CGGCGCAGGC GGGCCTGTAC AGGCACTACG GCATTCCGAA GCGGCCGCTT
GCGGAGAAGT GTTTCGGGGT GTTCGAGCAC ACGGTCGATT TACGCTGCGA CCTGACGCGC
GGATTCGACG ATCGCTTTCT GGCGCCGCAT TCCCGCCATA CGGACGTCGC CATCGAAGAC
GTCGCGCGCG TGCCCGAACT GCAAATTTTG TCCACGTCGT CCGAGGCGGG CCTGTATCTC
GCCGCGACAC CGGACGCGAG CCAGATTTTT GTGACCGGCC ACCCCGAGTA TGACGCGACG
ACGCTCGCGG AGGAGTACGA GCGGGACGTC CAGCGCGGAA TGGAGATCCA GCTACCCAAG
AACTATTTCC CAGGCGATGA TCCCACCCAA GCGCCGCTCA ATCGCTGGCG AGCCCACGCC
AACCTGCTGT TCGCGAACTG GTTGAACTAC TGCGTGTATC AGGTGACACC GTACGATCTC
AGCGGCCGCG TCCGCAAGCG CCAGGCTCAA GCGTGA
 
Protein sequence
MPIKVPDDLP AKEILAAEQI FVMGYQRAFT QDIRPLKILI LNLMPKKEVT ETQLLRLLGN 
SPLQVEVTLL RMRSHVAKNT PAEHLEMFYQ TFDEVSEQAF DGMIITGAPV EHLPFEEVTY
WDELCEILDW TRSAVTSTLH ICWAAQAGLY RHYGIPKRPL AEKCFGVFEH TVDLRCDLTR
GFDDRFLAPH SRHTDVAIED VARVPELQIL STSSEAGLYL AATPDASQIF VTGHPEYDAT
TLAEEYERDV QRGMEIQLPK NYFPGDDPTQ APLNRWRAHA NLLFANWLNY CVYQVTPYDL
SGRVRKRQAQ A