Gene Aaci_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1947 
Symbol 
ID8425468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1997989 
End bp1999071 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content70% 
IMG OID645028063 
Productnicotinate-nucleotide/ dimethylbenzimidazolephosp horibosyltransferase 
Protein accessionYP_003185348 
Protein GI258511914 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCAAA CAGACCTCCA TCTGCCCTCG CCGCGCCACG TCGATCCGTC TTGGCGGGCG 
AAGCTTCAGG CGCGGCTCGA CGCGCTCGCG AAACCTACCG GCAGCCTCGG CTCCCTCGAA 
CCCGTGCTTT GCGACATCGC GGCCATCCAA ACCACGGAGC ATCCGCGCGT CCGCCGCCCG 
TTCTTTCTGC TCTTCGCGGG CGATCACGGC GTCGCCAAGG ACCGCCCCAT CTCTCGCTAC 
GGCCAACACG TGACCGAGGA GATGGTGAAC CACATCGCCT CCGGCCGCAG CGTATCCACC 
GTATTGGCGA GATCGTTCGG GGTCCCTTGG CGCGTCTACG ACGTCGGCAT GGTGTCCACG 
CCCAGCCATC CGGACGTTCG GCGGTGCAAG GTGGCCGCGG GCACCCGCGA CTTCACGCGC 
GGGCCGGCCA TGACGCTCGA CGAGTGCGCG GCGGCGATTC GGATTGGCAT GCAGGCCGTG 
CGCGACGCAC GCGAGGACGG CGCGGATCTC GTGATCCTCG GCGAGATGGG CATCGGCAAC 
ACGACCGCGG CCAGCGCGCT CTCCGCCTGG CTCCTCGGCG TCGATGTCGA TCTCGTCGTC 
GGGACGGGCA CGGGCATTCA CGAGCAGGCG CTCGCCGAGA AGCGTCTGGT GGTGCGCACC 
GCCCTCAGCG TGTGGCGCGA TCGCGCACCG TCGTTCCCGC AGGGAGACGC GCGCTGGCTG 
GCAGGGCTCG CGCACCTGGG CGGCCTGGAA CTGGCGTCCA TCTGCGGTGC CGTGCTCGAG 
GCCGCCGCCA TCGGGCTGCC GGTCCTTCTG GACGGCGTGC TCGTCGGCGC CTGCGCCCTC 
TGGGCGGAAC GCACGCGGCC GGGCGTCCGC GACTACCTGA TTGCGGGCCA TCTGTCGCCC 
GAACCCGCGC ACGCGCTGTT GCTTGGCGAG CTCCGCAAAC GCCCGCTCCT CGATCTCGGC 
CTTCGCGTGG GCGAGGGATC GGGCGCGCTC ATGGCGTGGC CCATCCTGAG GGCTGGGCTC 
GACGTGCTCG AGGGCACCGC CATCTTTTCG GAACGAGCAA GGTCAGGGAG GGATGTGGAA 
TGA
 
Protein sequence
MAQTDLHLPS PRHVDPSWRA KLQARLDALA KPTGSLGSLE PVLCDIAAIQ TTEHPRVRRP 
FFLLFAGDHG VAKDRPISRY GQHVTEEMVN HIASGRSVST VLARSFGVPW RVYDVGMVST 
PSHPDVRRCK VAAGTRDFTR GPAMTLDECA AAIRIGMQAV RDAREDGADL VILGEMGIGN 
TTAASALSAW LLGVDVDLVV GTGTGIHEQA LAEKRLVVRT ALSVWRDRAP SFPQGDARWL 
AGLAHLGGLE LASICGAVLE AAAIGLPVLL DGVLVGACAL WAERTRPGVR DYLIAGHLSP 
EPAHALLLGE LRKRPLLDLG LRVGEGSGAL MAWPILRAGL DVLEGTAIFS ERARSGRDVE