Gene Aaci_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1944 
Symbol 
ID8425465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1995425 
End bp1996483 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID645028060 
Productperiplasmic binding protein 
Protein accessionYP_003185345 
Protein GI258511911 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACGCGC GCGGGCATTC CGTCCGCCAT TTCTTCGAAT GGGACCGCTC CACGTACAGA 
TTGGGGGGTC CACACGTGTT GAAACATGGG ATGTTCAAAG GAACCGCGTT GGCTGCGGCG
CTTGCGCTCA GCGCCATGGT CTCAGGTTGC GGCACGCCGC ACGCCACGCA AAACAGCCTC
ACCTCCAACT CGAGCGCAGC CTCAGCCATT TCGTACCCCA TGACCGTGAA GGACGACATG
GGGAACACGG TCACCCTGAA ACACCAGCCG ATGCGCATCG TGTCCGGTTC GGAGGGCACG
GACGAGATCC TCGTCTCGCT CGTCCCCAGA TCTCGCATCG CGCTCGTGAC GACCATGGCG
TCCAATCCCG AGTACTCGAA TGTGGTCGCC CAGGTCAAGG GCATTCCCGC TTGGAGCGGG
GACGACCCGG AACAGGCGCT GGCCGTCCAT CCCGATCTCG TCCTCGAGGC GGGCTACGTC
ACGAAGAGCG TGCTCGATCA ACTCCATCAA GCCGGCGTCC CCATGTACGC GTTCAGCCTG
AATGACTTCA ACTCCATCGC CGACATCGAG AAGAACATCC TGACCGTCGG CCGGCTCGTC
GGCGAGCCCG CCAAGGCCAA CGCGCTCGTC GCCAACATGA AGCAGGACAT CACGCAAATC
GAAGGCGCGG TTCAAGGCCA ACCGCGGCCG ACCGTCCTCG ACTACGGCTC GTATGGCTAT
GCGGCCGGTC GCGACACGAC CGTCGACGAC ATCATCCGCG ACGCGGGCGG CGTGAACGTG
GCGCACATGT TGAACGGGTG GCAGAAGATC ACGGACGAGC AGATCGTGAA GTGGAACCCG
GACGTGATCA TCGACTCGTC CGACGACGCG GCCTTCCTGA AGAAACTTGC CTCGGATCCG
GCGCTGCAGT CGGTCACCGC GGTGCGCGAG CATCACCTGT ACGCCATCAA CAGCGCCGAT
CTTTCCTCGG TGTCGCAGTA TGTCGTCCGC GCCGTGTACG ACGTCGCGAA GGTGCTGCAC
CCCACCGCGC ACCTGAAGGC GCCGAAGGTG ATGGCATGA
 
Protein sequence
MHARGHSVRH FFEWDRSTYR LGGPHVLKHG MFKGTALAAA LALSAMVSGC GTPHATQNSL 
TSNSSAASAI SYPMTVKDDM GNTVTLKHQP MRIVSGSEGT DEILVSLVPR SRIALVTTMA
SNPEYSNVVA QVKGIPAWSG DDPEQALAVH PDLVLEAGYV TKSVLDQLHQ AGVPMYAFSL
NDFNSIADIE KNILTVGRLV GEPAKANALV ANMKQDITQI EGAVQGQPRP TVLDYGSYGY
AAGRDTTVDD IIRDAGGVNV AHMLNGWQKI TDEQIVKWNP DVIIDSSDDA AFLKKLASDP
ALQSVTAVRE HHLYAINSAD LSSVSQYVVR AVYDVAKVLH PTAHLKAPKV MA