Gene Aaci_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1896 
Symbol 
ID8425417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1944273 
End bp1945247 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID645028012 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003185297 
Protein GI258511863 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACG CACTCGCGAC CGCGCAGGCG ACCGCCCTCG TCGACGTGCG CGATCTCGTC 
GTCCGCTTTC CCATCGGTCG CGGCCGGTTC ATACGCCCGG TCGATCACGT CAGTTTCTCG 
CTCCAGCCCG GCGAGGTGTT GTCGCTCGTG GGCGAGTCGG GATCGGGCAA GTCCACCATT 
GGCAAGGCGT TGGTGCGGAT GATCGAGCCG TCGGAGGGCG AGATCTGGGT GGCTGGACGC 
GATGTGGCGC ACATCCGGGG GCGAGAACTG AAGGCGTATC GAAAGGACGC TCAGATGGTG 
TTTCAGGATC CATTCGGTTC GCTCAACCCG ACGCGGACCA TCGAACAACA CCTGGTGTTT 
CCGGTGCGGA AGTACCGCCG CGAGGGCCAG GGCCGCGTGA GCGATCTCAT CGACGAGCTA 
CTCGCCAAGG TGGGGTTGAC GCCGGTCACC GAGACGCGGC GGAAGTACCC GCACGAGCTG 
TCGGGTGGCC AGCGGCAGCG CGTGGCCATC GCCCGCGCGC TCGCGGTGAA CCCCAAATTC 
ATCGTCGCCG ACGAGCCCAT CTCCATGCTC GACGTGTCGA TACGCGCCGG GATTCTCAAG 
CTGATGAACG AACTGCGCGA GGAGATGAAC ATCGCGTTCC TGTATATCAC GCACGATCTC 
GCCTCGGCGC GCTACATCGG CAACCGGATC ATGGTGCTTT ATGGCGGTAA AGTCATGGAA 
ACGGCGCCGT CCGCCGAGCT GATTCGGCGC CCGGTGCACC CGTACACGCG GCTGTTGTTT 
GCGGCGACCC CGGGCACACG CCACCAGGGG CCGCTGCCGG AGACGTCGAA CCGCCCGCCG 
AACCTACTCG AGGATCGCGT CGGATGCCCG TTCGCCGACA GGTGTCCGCT CGTGTCCGAC 
GTATGCCGGT CGCAGGAGCC GCCGCTCGCG GAGGTGGCGC CCGGGCACTA CGCCGCGTGC 
CATCATCCGG GCTGA
 
Protein sequence
MSDALATAQA TALVDVRDLV VRFPIGRGRF IRPVDHVSFS LQPGEVLSLV GESGSGKSTI 
GKALVRMIEP SEGEIWVAGR DVAHIRGREL KAYRKDAQMV FQDPFGSLNP TRTIEQHLVF 
PVRKYRREGQ GRVSDLIDEL LAKVGLTPVT ETRRKYPHEL SGGQRQRVAI ARALAVNPKF 
IVADEPISML DVSIRAGILK LMNELREEMN IAFLYITHDL ASARYIGNRI MVLYGGKVME 
TAPSAELIRR PVHPYTRLLF AATPGTRHQG PLPETSNRPP NLLEDRVGCP FADRCPLVSD 
VCRSQEPPLA EVAPGHYAAC HHPG