| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1881 |
|---|
| Symbol | |
|---|
| ID | 8425401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 1928798 |
|---|
| End bp | 1929472 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645027996 |
|---|
| Product | ribose 5-phosphate isomerase |
|---|
| Protein accession | YP_003185282 |
|---|
| Protein GI | 258511848 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.806458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA AGCGGATGGC GGGTGAAGAA GCCGCAAAAC GGATTCAACC TGGGATGAAG
GTCGGCCTCG GGACGGGTTC GACGGCGTAC TACACCATTG TCGAAGTGGG GAGACGCGTC
AAGGAAGGGC TCGAGATCGT CGCCATTCCT ACGTCCCGCG AGACGGAGCG GTTGGCCCGA
GAGCTGGGGA TCCCCCTGAC CGATTTTCGC AGCTGTCCGC GCCTCGATCT CACCATCGAC
GGCGCGGACG CGGTCACGCC CGACCTTCAG CTCATCAAGG GCGGCGGTGG CGCGCTGTTG
CGCGAAAAGT TGGTCGCGTC CATCTCGGAT GAACTCATCA TCGTCGTGGA TGACAGCAAA
TTGTACGACT CTCTGTCGGG GCTCGCGATC CCCGTCGAAG TGGTTCCCTT CGCGTGGGAG
ACGACCGCGC GGCGGATCGA ACAGCTCGGC GGGCGTTGGA CCCTTCGCGA GCGAAACGGC
GAGACGTTCG TCACGGACAA TCACAATTAC ATCCTCGACA CGGTGTTCGA TGAAGTCGCC
GATCCGGCGG ACTTGGCGCG GCGTCTCAAG CTGACCACCG GGGTCGTGGA GTCGGGCCTG
TTCATCGACA TGGCGAACGA GGTGGCCATC GGCACCGATG AAGGCGTGGT GTGGCGGAAG
AAGCCAGGGA CTTGA
|
|---|
| Protein sequence | MEKKRMAGEE AAKRIQPGMK VGLGTGSTAY YTIVEVGRRV KEGLEIVAIP TSRETERLAR
ELGIPLTDFR SCPRLDLTID GADAVTPDLQ LIKGGGGALL REKLVASISD ELIIVVDDSK
LYDSLSGLAI PVEVVPFAWE TTARRIEQLG GRWTLRERNG ETFVTDNHNY ILDTVFDEVA
DPADLARRLK LTTGVVESGL FIDMANEVAI GTDEGVVWRK KPGT
|
|---|
| |