Gene Aaci_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1879 
Symbol 
ID8425399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1927766 
End bp1928422 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content60% 
IMG OID645027994 
ProductSNARE associated Golgi protein 
Protein accessionYP_003185280 
Protein GI258511846 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.302356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGGGT TTGTTAAGCA GCTGCTCACA GATTGGCGCA CCATTGCGAT GATCCTGTCG 
GGCGCCCTGG TGGCGGTGGT GGTTCTGTAT TTGGATCGGA ACCATCGGCT GACCGACTGG 
ATTCAGTCGT GGGGATTCTG GGGCGTGATC TGGGCCATCG CGATCATGGT GATCTGGTGC 
CTGACGCCCA TCCCGTCCGA AGGGCTTTTG ATCATCTTCC TGCGCGTGTT CGGGGTTGTC 
GCAGGAACGA CGTATGCGTG GATTGGATCC ACCATCAGCT CCATTCTGAT TTTTTTCATC 
GCCCGCCACT TTACGCGCAT CATGCTCCAA CGTGTGCAGC ATCACGAGCG GTTTGAGCAG 
GTCAACCATT GGGTTCGCGA GTGGGGAAGT TTGGGCTTGC TTCTGGCCCG CTTGCTCCCG 
GTGCCCGCGT TTCTCGTCAA CTATGTTGCC GGCATGATCC CAGCCACCTC GCTTTGGTCG 
TACACGTGGA CGGCCGTCGT GGCCATGGTG CCGTATTATT TGGGCGTGGC GTTGGTGTAC 
GCAGGCGTGT TTGGCAACTG GATCTACATC CTTCTGGGAT GTATCCCGCT CGCGGCGCTC 
GCGGTGTTTG CTGCGCTGTT GCGCCGCCGC GTGGGGCGAA ACGGCCACGC GAAGTGA
 
Protein sequence
MAGFVKQLLT DWRTIAMILS GALVAVVVLY LDRNHRLTDW IQSWGFWGVI WAIAIMVIWC 
LTPIPSEGLL IIFLRVFGVV AGTTYAWIGS TISSILIFFI ARHFTRIMLQ RVQHHERFEQ 
VNHWVREWGS LGLLLARLLP VPAFLVNYVA GMIPATSLWS YTWTAVVAMV PYYLGVALVY 
AGVFGNWIYI LLGCIPLAAL AVFAALLRRR VGRNGHAK