Gene Aaci_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1870 
Symbol 
ID8425390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1921106 
End bp1922161 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content61% 
IMG OID645027985 
Productcalcium/proton antiporter, CaCA family 
Protein accessionYP_003185271 
Protein GI258511837 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.757367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATGTCC TGATCTCGAT CGCTGCGGTG GTTCTGACCG CATGGAGCAT CGGCGTTCAT 
CTTTGGGTGC AAAGCCCTGT GATGCAGTTC TTTGTGTCGT CAGCGGCAGT CATCCCGCTC
GCGGCCATCA TGGGGCGGGC GACGGAGGCC ATCGCAGCGA GGTCCGGTGA GCGATTGGGA
GGCCTCTTAT CCGCGACGTT CGGCAACGCC GTCGAGCTTA TCATCGGCGT GTTTTCCCTG
AAGGACGGGC TCATTCCTTT GGTCAAGTCG TCCATCACGG GCTCCATCAT CAGCAATCTG
CTGTTTGTCT TGGGCCTTTC GTTCTTCGTA GGGGGATTGC GCCATCCGAT TCAGAAGTTC
AATGTCCGAG TGGCGCGCAG TCACGGCTCC ATGTTGATGC TGGGGATTGG CGTTGCGTTT
GTGGTGCCTA CCGCATTCGC CTACGGCGCC GCCCACGTAT CCCCGGTCCT GTCGTACGGG
GCAGCCGCCG TCTCCCTCGT GGTCTATCTA CTGGGACTCT ACTTCAGCCT GTTCACCCAT
CGCGAACTGT TTCAAGCGAT TCAGCATGAA GAGGACGACG CTTCCGCGCC GAGCAGGCCG
GTTCTCGTCC ATGTGGTGCT GCTCGCGGCC TCGACCGTTC TCGTCAGCCT GGAGAGCGAC
TGGTTGGTCG GGTCGGTGCG TTCCATCGCG GCACATCTCG GTTGGAGCGA AGTGTTCATC
GGCGTGGTGG TGGTGGCCAT CATCGGGAAT GCCGCCGAGC ACGCTTCGGC GGTTTGGATG
GCTTGGAAAA ACCGCATGGA TCTGTCGCTC GAGATTGCCG TGGGAAGCAC GCTTCAAGTC
GCCATGTTCA TCGCGCCGGT TCTGTTTTTC ATCGGCGCTT TGATGGGCGT TCCGTTCACG
TTCGCGTTCA CCTGGCCCGA GGTGGTCAGC ATGATGGCCG CCGTCTTGCT GGTGGTCGTT
CTCGTCATGG ATGGGGAGTC CAATTGGCTG GAAGGCGCCA TGGCCTTTGG CGCCTACGTG
GTGCTGGCGG CTGGCTTCTA CAGCTTGCCG GGGTGA
 
Protein sequence
MNVLISIAAV VLTAWSIGVH LWVQSPVMQF FVSSAAVIPL AAIMGRATEA IAARSGERLG 
GLLSATFGNA VELIIGVFSL KDGLIPLVKS SITGSIISNL LFVLGLSFFV GGLRHPIQKF
NVRVARSHGS MLMLGIGVAF VVPTAFAYGA AHVSPVLSYG AAAVSLVVYL LGLYFSLFTH
RELFQAIQHE EDDASAPSRP VLVHVVLLAA STVLVSLESD WLVGSVRSIA AHLGWSEVFI
GVVVVAIIGN AAEHASAVWM AWKNRMDLSL EIAVGSTLQV AMFIAPVLFF IGALMGVPFT
FAFTWPEVVS MMAAVLLVVV LVMDGESNWL EGAMAFGAYV VLAAGFYSLP G