Gene Aaci_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1836 
Symbol 
ID8425351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1883928 
End bp1884908 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content65% 
IMG OID645027946 
ProductPorphobilinogen synthase 
Protein accessionYP_003185237 
Protein GI258511803 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGT TTCGCCGCCA CCGGCGCCTG CGCCGCACAC CGTATCTGCG CGATCTTGTC 
CGGGAACACC GCGTCCACGC GGACGATCTC GTGTATCCCA TGTTCGTCGA GGAAGGCCTT
CGGGGGACCT CGCCCATCCA GTCCATGCCG GGCGTCTCGC GCTATGGGCT GGACGCGCTG
CGCAGGGAGA TCGCGTCGCT GTCAGAACTG GGGCTGAAGT CGGTGATCCT CTTCGGCATC
CCGCGCGAGA AGGACGAATT TTCCTCCTCC GCGTACCATG AGCACGGCGT GGTGCAGGAG
GCCATCCGCG CCATCAAGGC CGAAAACCCG GATCTCGTCG TCATCACGGA CGTGTGCCTG
TGCGAGTACA ATCCGCTTGG CCAATGCGGC CTCGTCCGGG ATGGGAAGAT CGTGAACGAT
CCGACGCTTG AGCTGTTGGC CAAGACCGCC GTGTCGCACG CGCAGGCGGG CGCGGACATC
GTGGCGCCTT CCGACATGAT GGACGGCCGC GTCGCGGCCA TTCGCGAGGC GCTCGATGCG
GGCGGCTTCG AGGACGTCAT TGTCCTGTCG TACGCGGTGA AATACGCGTC GTCGTTTTAC
GGCCCGTTCC GAGAAGCGGC AGACTCGGCG CCGCAGTTCG GCGATCGCAA GAGCTACCAG
ATGGACCCTG CCAACGGCCG TGAAGCGATG CGGGAGGCGA GATCGGACCT TGAAGAAGGA
GCCGACATGC TGATGGTGAA ACCGGCGCTC GCGTACATGG ACGTCACGGC TCGCCTGCGC
GCGGCGTTCG ACGTGCCTAT CGCGACCTAC AACGTGAGCG GCGAGTACAG CATGGTCAAG
GCGGCGGCTC AACACGGTTG GATCGACGAA AAGGCGGTCG TCATGGAAAT GATGACGTCG
TTCAAGCGCG CGGGCGCAGA CTTGATTCTC ACGTATCACG CGCCGGACGT GCTCCGCTGG
CTGCGGGAAG AGGCGCGCTG A
 
Protein sequence
MSQFRRHRRL RRTPYLRDLV REHRVHADDL VYPMFVEEGL RGTSPIQSMP GVSRYGLDAL 
RREIASLSEL GLKSVILFGI PREKDEFSSS AYHEHGVVQE AIRAIKAENP DLVVITDVCL
CEYNPLGQCG LVRDGKIVND PTLELLAKTA VSHAQAGADI VAPSDMMDGR VAAIREALDA
GGFEDVIVLS YAVKYASSFY GPFREAADSA PQFGDRKSYQ MDPANGREAM REARSDLEEG
ADMLMVKPAL AYMDVTARLR AAFDVPIATY NVSGEYSMVK AAAQHGWIDE KAVVMEMMTS
FKRAGADLIL TYHAPDVLRW LREEAR